NYU-BFX / lncRNA-screenLinks
lncRNA-screen
☆25Updated 8 years ago
Alternatives and similar repositories for lncRNA-screen
Users that are interested in lncRNA-screen are comparing it to the libraries listed below
Sorting:
- Long read to rMATS☆32Updated 2 years ago
- Python scripts for matching output of Pacific Biosciences IsoSeq RNA-seq pipeline to an annotation file.☆23Updated 10 years ago
- microRNA PREdiction From small RNA-seq data☆31Updated 8 years ago
- TADtool is an interactive tool for the identification of meaningful parameters in TAD-calling algorithms for Hi-C data.☆49Updated 3 years ago
- RNA-seq analysis scripts☆15Updated 2 months ago
- SQANTI2 is now replaced by SQANTI3. Please go to: https://github.com/ConesaLab/SQANTI3☆38Updated 5 years ago
- For biological deep sequencing data. Decompose a UCSC knownGenes/Ensembl GTF file into transcript regions (i.e. exons, introns, UTRs and…☆36Updated 2 years ago
- Long-read Isoform Quantification and Analysis☆38Updated 9 months ago
- ☆20Updated 3 years ago
- ☆14Updated 7 years ago
- All kinds of NGS analysis pipeline☆12Updated 6 years ago
- ☆38Updated 2 years ago
- an R/Shiny application for interactive creation of non-circular plots of whole genomes☆45Updated 7 months ago
- Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data☆18Updated 9 months ago
- ☆18Updated last year
- toolkit to process gtf files☆17Updated 4 years ago
- a bucket of bioinformatics scripts☆13Updated 3 weeks ago
- ☆16Updated 2 years ago
- Tools for processing and analyzing structural variants.☆34Updated 10 years ago
- A collection of tools to deal with Bisulfite-seq/NOMe-seq (SNP/Methylation calling: BisSNP; HMM segmentation: DMNTools; Visualization/Clu…☆32Updated 4 years ago
- ☆24Updated last year
- Reproducibility workflow for Gigante et al., 2018: Using long-read sequencing to detect imprinted DNA methylation☆23Updated 6 years ago
- This is a pipeline for variant annotation in the diagnosis of rare genetic disorders. It relies on open source data and has instructions …☆18Updated 2 years ago
- UNDER DEVELOPMENT--- Analysis of long non-coding RNAs from RNA-seq datasets☆34Updated 9 months ago
- ☆20Updated this week
- TEMP is a software package for detecting transposable elements (TEs) insertions and excisions from pooled high-throughput sequencing dat…☆22Updated 8 years ago
- Version II of Mandalorion☆32Updated 6 years ago
- ☆45Updated 8 years ago
- Updated and optimized fork of BSMAP☆23Updated 5 years ago
- SpliceWiz is an R package for exploring differential alternative splicing events in splice-aware alignment BAM files.☆21Updated last month