Alternatives and similar repositories for Notebooks-computational-metabolomics

Users that are interested in Notebooks-computational-metabolomics are comparing it to the libraries listed below

• shuzhao-li-lab / espol-workshop
  5-day workshop on Metabolomics and Data Analysis
  ☆18Updated 6 years ago
• workflow4metabolomics / workflow4metabolomics
  Workflow4Metabolomics meta repository
  ☆11Updated 8 months ago
• biswapriyamisra / metabolomics
  Tools Databases Resources in Metabolomics & Integrated Omics in 2015-2016
  ☆12Updated 5 years ago
• mohimanilab / MetaMiner
  a metabologenomic pipeline integrating metabolomic and genomic data to identify novel RiPPs and their BGCs
  ☆12Updated 4 years ago
• kwanjeeraw / metabox
  a toolbox for metabolomic data analysis, visualization and ‘omic’ integration
  ☆13Updated 7 years ago
• b2slab / FELLA
  FELLA: an R package for Metabolomics data enrichment through diffusion
  ☆22Updated 4 years ago
• respiratory-immunology-lab / metabolome-lipidome-MSDIAL
  Guide to processing raw LCMS metabolomic and lipidomic data using MS-DIAL, followed by data pre-processing and secondary annotation (of m…
  ☆22Updated last year
• WandeRum / MVI-evaluation
  Missing value imputation and evaluation, especially for metabolomics data sets
  ☆19Updated 7 years ago
• saezlab / ShinyFUNKI
  FUNctional toolKIt platform for multi-omic functional analysis. An standardised pipeline to analysis transcriptomic, proteomic, phospho…
  ☆14Updated 4 years ago
• dgrapov / CTSgetR
  R interface to Chemical Translation Service (CTS)
  ☆17Updated last year
• pcastellanoescuder / POMAShiny
  Web-based User-friendly Workflow for Metabolomics and Proteomics Data Analysis
  ☆18Updated 2 years ago
• saezlab / MetaProViz
  R-package to perform metabolomics pre-processing, differential metabolite analysis, metabolite clustering and custom visualisations.
  ☆17Updated last week
• cwieder / py-ssPA
  Single sample pathway analysis tools for omics data
  ☆13Updated last year
• rformassspectrometry / QFeatures
  Quantitative features for mass spectrometry data
  ☆28Updated 3 weeks ago
• mjhelf / Metaboseek
  Interactive software to analyze and browse mass spectrometry data
  ☆21Updated 6 months ago
• lemaslab / rump
  A Reproducible Untargeted Metabolomics Data Processing Pipeline
  ☆11Updated 4 years ago
• rformassspectrometry / MsCoreUtils
  Core Utils for Mass Spectrometry Data
  ☆17Updated last month
• ualr-Rgroup / metabolomics-in-r
  Supporting material for "Processing and visualization of metabolomics data using R"
  ☆20Updated 9 years ago
• rformassspectrometry / metaRbolomics-book
  The MetaRbolomics book. A review of R packages in BioC, CRAN, gitlab and github.
  ☆34Updated 4 years ago
• metabolomics-cloud / mummichog
  pathway and network analysis for metabolomics
  ☆43Updated last month
• barupal / ChemRICH
  Chemical Similarity Enrichment analysis of metabolomics datasets
  ☆30Updated last year
• yan-cri / DEApp
  DEAPP shiny App
  ☆30Updated 3 years ago
• joannawolthuis / MetaboShiny
  Repository for MetaboShiny, a novel R and RShiny based metabolomics data analysis package.
  ☆17Updated 9 months ago
• MRCIEU / metaboprep
  a pipeline of metabolomics data processing and quality control
  ☆27Updated last month
• himelmallick / IntegratedLearner
  Integrated Machine Learning for Multi-omics Classification and Prediction
  ☆26Updated 2 months ago
• nf-core / metaboigniter
  Pre-processing of mass spectrometry-based metabolomics data with quantification and identification based on MS1 and MS2 data.
  ☆24Updated 7 months ago
• jorainer / metabolomics2018
  Workshop illustrating mass spectrometry data analysis in R and use of the updated xcms functionality for the preprocessing of LC-MS data.
  ☆28Updated 2 years ago
• lianos / sparrow
  Take command of your set enrichment analyses.
  ☆22Updated this week
• yufree / enviGCMS
  GC/LC-MS data analysis for environmental science
  ☆17Updated 8 months ago
• waldronlab / curatedTCGAData
  Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects
  ☆44Updated 2 months ago