shuzhao-li-lab / Notebooks-computational-metabolomics
Notebooks in computational metabolomics
☆14Updated 2 months ago
Alternatives and similar repositories for Notebooks-computational-metabolomics:
Users that are interested in Notebooks-computational-metabolomics are comparing it to the libraries listed below
- 5-day workshop on Metabolomics and Data Analysis☆16Updated 5 years ago
- pathway and network analysis for metabolomics☆40Updated 10 months ago
- Missing value imputation and evaluation, especially for metabolomics data sets☆19Updated 6 years ago
- a metabologenomic pipeline integrating metabolomic and genomic data to identify novel RiPPs and their BGCs☆12Updated 3 years ago
- a pipeline of metabolomics data processing and quality control☆25Updated last year
- Visualizing and Analyzing Mass Spectrometry Related Data in Proteomics☆11Updated 3 weeks ago
- Quantitative features for mass spectrometry data☆27Updated 3 weeks ago
- The MetaRbolomics book. A review of R packages in BioC, CRAN, gitlab and github.☆33Updated 4 years ago
- Proteomics Toolset for Integrative Data Analysis☆22Updated 2 weeks ago
- R codes for creating metamapp graphs and files☆8Updated 2 years ago
- GREIN : GEO RNA-seq Experiments Interactive Navigator☆49Updated 5 years ago
- Repository for MetaboShiny, a novel R and RShiny based metabolomics data analysis package.☆17Updated last week
- R package for analysing proteomics data☆49Updated 2 years ago
- Chemical Similarity Enrichment analysis of metabolomics datasets☆28Updated 9 months ago
- FUNctional toolKIt platform for multi-omic functional analysis. An standardised pipeline to analysis transcriptomic, proteomic, phospho…☆13Updated 3 years ago
- ☆10Updated 6 years ago
- R package for easy interop between Perseus and R☆14Updated 2 years ago
- ☆17Updated 4 months ago
- Tools Databases Resources in Metabolomics & Integrated Omics in 2015-2016☆12Updated 5 years ago
- a toolbox for metabolomic data analysis, visualization and ‘omic’ integration☆13Updated 6 years ago
- This is the ensembldb development repository.☆35Updated 8 months ago
- DEAPP shiny App☆30Updated 2 years ago
- MetNormalizer is used to normalize large scale metabolomics data.☆21Updated 4 years ago
- FELLA: an R package for Metabolomics data enrichment through diffusion☆22Updated 4 years ago
- Single sample pathway analysis tools for omics data☆12Updated 5 months ago
- MeSH Enrichment and Semantic analyses☆12Updated last week
- PathIntegrate Python package for pathway-based multi-omics data integration☆16Updated 5 months ago
- Supporting material for "Processing and visualization of metabolomics data using R"☆19Updated 8 years ago
- R functions for automation of biomarker discovery based on processing downstream of large LC-MS datasets from any peak picking software☆10Updated 7 years ago
- LIMMA (an empirical Bayes method) pipeline for two group comparison in a proteomic experiment☆26Updated last year