biocore / emperorLinks
Emperor a tool for the analysis and visualization of large microbial ecology datasets
☆54Updated 2 months ago
Alternatives and similar repositories for emperor
Users that are interested in emperor are comparing it to the libraries listed below
Sorting:
- The Biological Observation Matrix (BIOM) Format Project☆95Updated last month
- Indexing & querying large assembly graphs -- in space, no one can hear you miao!☆118Updated this week
- just annotate it, dammit!☆93Updated 2 years ago
- Sample search by metadata and features☆47Updated 2 years ago
- Metagenomic profiling and phylogenetic distances via common kmers☆42Updated 4 years ago
- chitin: an awful shell for awful bioinformaticians☆61Updated 5 years ago
- A pipelining tool to automate and standardise bioinformatics analyses on cluster environments.☆98Updated 2 years ago
- Python library to simulate evolutionary sequence data☆80Updated 3 years ago
- compositional data analysis toolbox☆60Updated 2 years ago
- Confirming specific taxonomic groups within your samples.☆19Updated 4 years ago
- Provides access to complex Bioinformatics software (even BioLinux!) in just one command.☆76Updated 8 years ago
- The MG-RAST Backend -- the API server☆46Updated 2 years ago
- An imagemagick-like frontend to Biopython SeqIO☆116Updated last year
- Fishers Exact Test for Python (Cython)☆66Updated 8 months ago
- The MG-RAST pipeline☆23Updated 3 years ago
- Reduced Alphabet based Protein similarity Search☆40Updated 5 years ago
- Qiita - A multi-omics databasing effort☆127Updated last week
- List of computational resources for analyzing microbial sequencing data.☆67Updated 3 weeks ago
- ☆67Updated 9 years ago
- De novo transcriptome assembler for short reads☆64Updated 7 years ago
- Git mirror of Bioconductor SRAdb package☆23Updated 7 years ago
- ☆21Updated 7 months ago
- Interactive tools for metagenome visualization and binning in R☆27Updated 7 years ago
- SHallow shOtGUN profiler☆53Updated 3 years ago
- EMIRGE reconstructs full length ribosomal genes from short read sequencing data.☆37Updated 2 years ago
- Inferring spatiotemporal dynamics of the H1N1 influenza pandemic from sequence data☆32Updated 12 years ago
- de novo virus assembler of Illumina paired reads☆58Updated 4 years ago
- A library and collection of scripts to work with Illumina paired-end data (for CASAVA 1.7+ pipeline).☆93Updated 2 weeks ago
- A robust and fast clustering method for amplicon-based studies☆142Updated last month
- In this repo you will find demos and tutorials prepared by members of the CBIB. Feel free to use them for non-commercial activities given…☆84Updated 7 years ago