A Qiime plugin for MICOM.
☆10Sep 22, 2026Updated last month
Alternatives and similar repositories for q2-micom
Users that are interested in q2-micom are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Conversion software tool for producing both annotation and tree files for GraPhlAn☆11Feb 2, 2022Updated 4 years ago
- Materials and presentation for the 2023 ISB Microbiome course.☆25Sep 25, 2024Updated 2 years ago
- ☆12Sep 1, 2026Updated 2 months ago
- Scripts and documentations on the MCSC decontamination method☆10Jun 13, 2023Updated 3 years ago
- Vanilla regression methods for microbiome differential abundance analysis☆61Nov 3, 2020Updated 6 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Genome-scale model of Yarrowia lipolytica.☆13Jul 8, 2026Updated 3 months ago
- Add multiple thread function for genome comparison☆17Sep 29, 2021Updated 5 years ago
- ☆21Updated this week
- R package for microbiome analysis. Provides helper functions for common workflows ranging from preprocessing to visualization.☆24Jan 24, 2024Updated 2 years ago
- mapping files for MetaCyc pathway☆14Sep 14, 2019Updated 7 years ago
- Constraint-based modeling framework for the enumeration of pathway analysis concepts☆14Jul 6, 2023Updated 3 years ago
- Script for Lulu et al. (2026) "Multi-ancestry GWAS of age-related hearing loss identifies 140 loci and key cellular mechanisms". Nature C…☆13Oct 1, 2026Updated last month
- ☆11Mar 16, 2022Updated 4 years ago
- A visualization tool for Systems-Level Interactive Data Exploration☆13Jan 12, 2022Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆10Oct 27, 2015Updated 11 years ago
- VAriant Mapping and Prediction of antimicrobial resistance☆12Jun 8, 2026Updated 4 months ago
- Sparse Cooccurence Network Investigation for Compositional data☆26Oct 27, 2026Updated last week
- ☆11Sep 5, 2025Updated last year
- Hierarchical orderings for mass spectrometry data. Canonically pronounced "chemis-tree".☆31Apr 11, 2023Updated 3 years ago
- Scalable/Distributed Computer Vision with Ray☆11Mar 11, 2023Updated 3 years ago
- Genome assembly scaffolding using information from paired-end/mate-pair libraries, long reads, and synteny to closely related species.☆23Dec 6, 2018Updated 7 years ago
- Command line client and Python libraries for CosmosID API☆13Oct 28, 2025Updated last year
- Debiased Inverse-Variance Weighted Estimator in Two-Sample Summary-Data Mendelian Randomization☆10Nov 19, 2025Updated 11 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Golang NEST library☆14Jan 6, 2015Updated 11 years ago
- A set of cursors for KDE☆10Apr 13, 2014Updated 12 years ago
- Modeling variable guide efficiency in pooled CRISPR screens with ContrastiveVI+☆11May 5, 2025Updated last year
- COBRAdb loads genome-scale metabolic models and genome annotations into a relational database. It already powers BiGG Models, and it is a…☆20Oct 29, 2019Updated 7 years ago
- Source code of FUMA GWAS web application☆14Updated this week
- 16S rRNA Sequencing Data from the Human Microbiome Project☆11May 14, 2026Updated 5 months ago
- Deep Treatment Learning (R)☆17Nov 9, 2022Updated 3 years ago
- a toolkit for evaluation of the lenght of k-mer in a given genome dataset for alignment-free phylogenimic analysis.☆15Nov 21, 2024Updated last year
- ☆12Dec 28, 2019Updated 6 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- R package for differential expression analysis in metatranscriptomics☆12Jul 18, 2024Updated 2 years ago
- Typesafe, validated ES2015 proxies☆11Feb 3, 2019Updated 7 years ago
- kmer-based software for detecting bacterial strain genomes inside metagenomes☆12Dec 11, 2024Updated last year
- HELM-GPT: de novo macrocyclic peptide design using generative pre-trained transformer☆38May 15, 2026Updated 5 months ago
- ☆12Jun 16, 2023Updated 3 years ago
- Methods for converting eQTL summary statistics into TWAS SNP-weights☆15Jul 2, 2025Updated last year
- Supplementary data for co-occurrence manuscript☆11Dec 19, 2019Updated 6 years ago