Alternatives and similar repositories for q2-qemistree

Users that are interested in q2-qemistree are comparing it to the libraries listed below

• RASpicer / MetabolomicsTools
  ☆55Updated 4 years ago
• LiChenPU / NetID
  A global network optimization approach for untargeted LC-MS metabolomics data annotation and metabolite discovery
  ☆46Updated last year
• zmahnoor14 / MAW
  Metabolome Annotation Workflow
  ☆25Updated last year
• robinschmid / microbe_masst
  Using MASST or fastMASST, adding metadata onto a tree ontology for microbes
  ☆21Updated 4 months ago
• shuzhao-li / mummichog
  pathway and network analysis for metabolomics
  ☆42Updated last year
• iomega / ms2query
  MS2Query - machine learning assisted library querying of MS/MS spectra
  ☆45Updated 2 months ago
• Functional-Metabolomics-Lab / FBMN-STATS
  FBMN-STATS: A hitchhiker's guide to statistical analysis of Feature-based Molecular Networks
  ☆39Updated last month
• biosustain / snakemake_UmetaFlow
  Untargeted metabolomics workflow for large-scale data processing and analysis implemented in Snakemake
  ☆27Updated 7 months ago
• xia-lab / OptiLCMS
  R package for optimized LC-MS spectra processing
  ☆25Updated this week
• wfondrie / ppx
  A Python interface to proteomics data repositories
  ☆34Updated last month
• CCMS-UCSD / GNPS_Workflows
  Public Workflows at GNPS
  ☆62Updated last year
• jorainer / metabolomics2018
  Workshop illustrating mass spectrometry data analysis in R and use of the updated xcms functionality for the preprocessing of LC-MS data.
  ☆28Updated 2 years ago
• shuzhao-li-lab / asari
  asari, metabolomics data preprocessing
  ☆51Updated this week
• eMetaboHUB / MS-CleanR
  ☆25Updated last year
• Philipbear / BUDDY_Metabolomics
  Molecular formula discovery via bottom-up MS/MS interrogation
  ☆14Updated 11 months ago
• Gscorreia89 / chemometrics-tutorials
  ☆15Updated 2 years ago
• HaoGroup-ProtContLib / Protein-Contaminant-Libraries-for-DDA-and-DIA-Proteomics
  This project is created by the Hao Lab at the Chemistry Department in George Washington University, Washington, D.C. This project aims to…
  ☆25Updated 8 months ago
• rickhelmus / patRoon
  Workflow solutions for mass-spectrometry based non-target analysis.
  ☆66Updated this week
• madeleineernst / pyMolNetEnhancer
  ☆20Updated 2 years ago
• dosorio / Peptides
  An R package to calculate indices and theoretical physicochemical properties of peptides and protein sequences.
  ☆89Updated last year
• fermo-metabolomics / FERMO
  Dashboard for analysis of liquid chromatography (tandem) mass spectrometry data.
  ☆32Updated 2 months ago
• wfondrie / mokapot
  Fast and flexible semi-supervised learning for peptide detection in Python
  ☆47Updated 5 months ago
• jessegmeyerlab / proteomics-tutorial
  ☆62Updated last year
• evocellnet / funscoR
  R package for functionally scoring phosphorylation sites
  ☆21Updated 5 years ago
• pFindStudio / pDeep3
  MS/MS prediction for peptides
  ☆24Updated 4 years ago
• systemsomicslab / mtbinfo.github.io
  ☆29Updated last year
• MannLabs / structuremap
  Python package for investigating the structural context of PTMs
  ☆28Updated 6 months ago
• MSGFPlus / msgfplus
  MS-GF+ (aka MSGF+ or MSGFPlus) performs peptide identification by scoring MS/MS spectra against peptides derived from a protein sequence …
  ☆79Updated last year
• multimeric / Unipressed
  Comprehensive Python client for the Uniprot REST API
  ☆50Updated last month
• EMSL-Computing / PeakDecoder
  A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.
  ☆16Updated 2 years ago