A package for creating and managing sample identifiers in comparative -omics datasets.
☆23Jan 30, 2017Updated 9 years ago
Alternatives and similar repositories for cual-id
Users that are interested in cual-id are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A simple keylogger for macOS☆22Sep 29, 2021Updated 4 years ago
- Always on top desktop viewer for Netflix☆15Mar 27, 2022Updated 4 years ago
- Emperor a tool for the analysis and visualization of large microbial ecology datasets☆54Jan 12, 2026Updated 6 months ago
- Command line interface and Python client library for the One Codex API☆25Updated this week
- Whole genome focused array SNP typer☆14Feb 2, 2026Updated 5 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Python and Rust library for loading, saving, and manipulating taxonomic trees☆54Jun 22, 2026Updated last month
- A repository for storing code and data related to a systematic comparison of short read taxonomy assignment tools☆16Oct 11, 2017Updated 8 years ago
- qiime2 plugin for aldex2 for differential abundance analysis☆11Mar 5, 2020Updated 6 years ago
- Mark2Cure allows anyone that can read English, regardless of background, to help in the process of biomedical discovery.☆14Jan 11, 2023Updated 3 years ago
- ☆14Feb 6, 2020Updated 6 years ago
- R package for microbiome analysis. Provides helper functions for common workflows ranging from preprocessing to visualization.☆25Jan 24, 2024Updated 2 years ago
- Repo for course Tools for complex data analysis☆11Jul 15, 2024Updated 2 years ago
- Generate Galaxy tool descriptions automatically from QIIME 2 actions.☆20May 15, 2026Updated 2 months ago
- edit distance sequence tags and helpers☆12Feb 4, 2021Updated 5 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- STAMPS 2018 course☆14Aug 8, 2018Updated 7 years ago
- Sparse Cooccurence Network Investigation for Compositional data☆26Updated this week
- Snakemake template for building reusable and scalable machine learning pipelines with mikropml☆13Feb 26, 2025Updated last year
- ☆24May 6, 2020Updated 6 years ago
- Flexible omics pipeline☆17Oct 16, 2025Updated 9 months ago
- Workshop for NGS'18 conference, Barcelona 2018☆24Nov 22, 2018Updated 7 years ago
- Workflow to generate interactive feature selection report for cross-sectional or longitudinal studies☆11Apr 3, 2026Updated 3 months ago
- Hierarchical orderings for mass spectrometry data. Canonically pronounced "chemis-tree".☆31Apr 11, 2023Updated 3 years ago
- Snakemake workflow for comparison of differential abundance ranks☆13Mar 22, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Bloom filter implementation in Nimrod☆16May 26, 2023Updated 3 years ago
- This software implements a high-throughput data processing pipeline to identify and charaterize SARS-CoV-2 variant sequences in specimens…☆11Aug 1, 2023Updated 2 years ago
- Tools to gather evidence for structural variation via breakpoint detection.☆21Mar 27, 2026Updated 4 months ago
- Functions for compositional analysis of high throughput sequencing☆29Dec 8, 2023Updated 2 years ago
- annotation pipeline for microbial genomes and metagenomes☆18Feb 23, 2018Updated 8 years ago
- Companion notebooks for "Dog and human inflammatory bowel disease rely on overlapping yet distinct dysbiosis networks"☆11Jul 13, 2018Updated 8 years ago
- Design and implementation of FAIR Data Cube☆11Jun 2, 2025Updated last year
- Experimental pipeline to perform de novo PICRUSt on de-noised amplicon sequence variants (ASV)☆19Oct 23, 2018Updated 7 years ago
- A collection of CSV/TSV Utilities☆13Jun 2, 2020Updated 6 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Simplify snpEff annotations for interesting cases☆22Feb 18, 2019Updated 7 years ago
- Repository of standardized biological experimental data and metadata☆16Jan 9, 2025Updated last year
- A known-to-unknown metabolite identification workflow☆22Sep 15, 2020Updated 5 years ago
- exploratory and interactive microbiome analyses based on heatmaps☆27Jan 27, 2025Updated last year
- Linear Decomposition Model☆25Jun 16, 2023Updated 3 years ago
- Metagenomic profiling and phylogenetic distances via common kmers☆42Jul 12, 2021Updated 5 years ago
- Qiita - A multi-omics databasing effort☆132May 8, 2026Updated 2 months ago