Alternatives and similar repositories for cual-id

Users that are interested in cual-id are comparing it to the libraries listed below

• sjackman / docker-bio
  Docker images of bioinformatics software
  ☆21Updated 8 years ago
• EliLillyCo / pytest-wdl
  WDL plugin for pytest
  ☆48Updated 2 years ago
• ajrichards / htsint
  A Python library to work with high-throughput sequencing data in the context of data integration
  ☆14Updated 8 years ago
• stjudecloud / ngsderive
  Forensic analysis tool useful in backwards computing information from next-generation sequencing data.
  ☆12Updated this week
• wormtable / wormtable
  Write-once-read-many table for large datasets.
  ☆27Updated last year
• biobuilds / biobuilds
  Curated collection of open-source bioinformatics tools
  ☆28Updated 6 years ago
• sejmodha / MetaViC
  Virus metagenomic pipeline for unknown host or in absence of a host genome
  ☆18Updated 6 years ago
• olgabot / abi2fastq
  abi2fastq is a small utility to convert Sanger sequencing reads in .abi (applied biosystems) format to FASTQ
  ☆11Updated 8 years ago
• cjlee112 / pygr
  Python graph database framework for bioinformatics
  ☆93Updated 3 years ago
• refinery-platform / refinery-platform
  The Refinery Platform is a data management, analysis and visualization system for bioinformatics and computational biology applications. …
  ☆105Updated 2 years ago
• smithijk / vcf_fdw_postgresql
  A PostgreSQL foreign data wrapper for VCF files.
  ☆18Updated 8 years ago
• tseemann / homebrew-bioinformatics-linux
  Homebrew formulae for bioinformatics software only available for Linux
  ☆27Updated 6 years ago
• ga4gh / htsget
  Python client for GA4GH htsget protocol
  ☆15Updated 2 years ago
• iobio / iobio.viz
  Visualization and charting JS library for streaming genomic data
  ☆19Updated 9 months ago
• bendmorris / taxiphy
  Common repository for scripts to generate trees from taxonomies. Currently includes ITIS, NCBI, and GBIF.
  ☆16Updated 9 years ago
• danknights / mwas
  Perform microbiome-wide association studies with a variety of models
  ☆18Updated 8 years ago
• Novartis / railroadtracks
  Railroadtracks is a Python package to handle connected computation steps for DNA and RNA Seq.
  ☆14Updated 10 years ago
• IQTLabs / freqgen
  🎯 Generate DNA sequences with specified amino acid, codon, and k-mer frequencies
  ☆17Updated 2 years ago
• tiagoantao / pygenomics
  A library for next generation genomics in Python 3
  ☆18Updated 7 years ago
• biosustain / goodbye-genbank
  A Python package for Biopython that gives feature annotations from GenBank records a new and better life
  ☆14Updated 9 years ago
• bgruening / coding_for_big_data
  X things you should take into consideration if you code for big data analysis
  ☆23Updated 7 years ago
• soumitag / SLIDE
  A visualization tool for Systems-Level Interactive Data Exploration
  ☆12Updated 3 years ago
• EESI / themetagenomics
  ☆24Updated 5 years ago
• johanneskoester / alpaca
  ALPACA is a caller for genomic variants (single nucleotide and small indels) from next-generation sequencing data that uses a novel algeb…
  ☆23Updated 10 months ago
• LANL-Bioinformatics / EDGE
  EDGE is a highly adaptable bioinformatics platform that allows laboratories to quickly analyze and interpret genomic sequence data.
  ☆75Updated 3 weeks ago
• stevetsa / awesome-microbes
  List of computational resources for analyzing microbial sequencing data.
  ☆67Updated 3 months ago
• lgautier / fastq-and-furious
  Efficient handling of FASTQ files from Python
  ☆51Updated last month
• ChillarAnand / fadapa
  FAstqc DAta PArser - A minimal parser to parse FastQC output data.
  ☆16Updated 9 years ago
• dnanexus / dxWDL
  Workflow Description Language compiler for the DNAnexus platform
  ☆42Updated 2 years ago
• clintval / genome-browser
  A lightweight Python graphing API for genomic features
  ☆15Updated 3 years ago