Alternatives and similar repositories for RCA

Users that are interested in RCA are comparing it to the libraries listed below

• duncanwadsworth / dmbvs
  Dirichlet-Multinomial Bayesian Variable Selection
  ☆14Updated last year
• dcgerard / vicar
  Various Ideas for Confounder Adjustment in Regression
  ☆24Updated 2 years ago
• csoneson / treeclimbR
  ☆20Updated 2 months ago
• KlugerLab / oocPCA
  Out-of-Core Principal Component Analysis
  ☆19Updated 7 years ago
• msantolini / dynamo
  DYNamics Agnostic Network MOdels
  ☆18Updated 6 years ago
• maiermarco / DirichletReg
  ☆13Updated 3 years ago
• andreaskapou / scMET
  Bayesian modelling of DNA methylation heterogeneity at single-cell resolution
  ☆23Updated last year
• insitro / AllelicSeries
  Implementation of gene-level rare coding variant association tests targeting allelic series: cases where increasingly deleterious mutatio…
  ☆13Updated 2 months ago
• StatGenPRD / STOPGAP
  Scripts for generating integrated dataset from publically available data sources to evaluate known genetic associations evidence of varyi…
  ☆11Updated 5 years ago
• dirmeier / diffusr
  Network diffusion algorithms in R.
  ☆21Updated last year
• anna-neufeld / datathin
  ☆14Updated last year
• calico / impulse
  Fit phenomenological sigmoid and impulse curves with priors to improve interpretability
  ☆10Updated last year
• willtownes / glmpca
  ☆94Updated last year
• stephaniehicks / benchmark-hdf5-clustering
  Benchmarking project for scalable clustering algorithms with large observations and HDF5 files
  ☆8Updated 4 years ago
• HenrikBengtsson / aroma.affymetrix
  🔬 R package: Analysis of Large Affymetrix Microarray Data Sets
  ☆10Updated 3 months ago
• CristianCastiglione / sgdGMF
  Efficient stochastic gradient descent algorithms for the estimation of generalized matrix factorization models in R.
  ☆11Updated 2 weeks ago
• timothy-barry / ondisc
  Space- and time-optimal algorithms for large single-cell expression matrices, with a focus on single-cell CRISPR screens.
  ☆11Updated last year
• gmiaslab / pyiomica
  PyIOmica (pyiomica) is a Python package for omics analyses.
  ☆15Updated last week
• nyiuab / BhGLM
  BhGLM (Bayesian hierarchical GLMs and survival models)
  ☆19Updated last year
• UBod / apcluster
  R package implementing affinity propagation clustering along with various utilities
  ☆11Updated last year
• stephenslab / flashr
  R package for Empirical Bayes Factor Analysis.
  ☆50Updated 6 months ago
• kokrah / HTShape
  Shape analysis of high-throughput data
  ☆19Updated 9 years ago
• jchiquet / aricode
  R package for computation of (adjusted) rand-index and other such scores
  ☆26Updated last year
• kharchenkolab / vrnmf
  Volume-regularized NMF
  ☆17Updated 3 years ago
• mararie / lionessR
  Single sample network reconstruction in R
  ☆22Updated 5 years ago
• csoneson / iCOBRA
  Interactive benchmarking of ranking and assignment methods
  ☆16Updated 2 months ago
• ChristophH / Inferelator
  The official Inferelator repository maintained by current or former Bonneau lab members
  ☆9Updated 7 years ago
• drisso / zinbwave
  Clone of the Bioconductor repository for the zinbwave package, see https://bioconductor.org/packages/zinbwave
  ☆43Updated last year
• waldronlab / curatedTCGAData
  Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects
  ☆44Updated last month
• ropensci / plater
  Tools to make it easy to work with microtiter plate-shaped data
  ☆23Updated 8 months ago