simonsfoundation / jp_gene_viz
A collection of visualizations for genomics related information for use with Jupyter notebooks.
☆10Updated 2 years ago
Related projects ⓘ
Alternatives and complementary repositories for jp_gene_viz
- Tool to easily start up an IPython cluster on different schedulers.☆148Updated 4 years ago
- %conda magic for IPython☆28Updated 7 years ago
- Deploy Dask on DRMAA clusters☆40Updated 3 years ago
- Execute scripts in their own temporary environment☆72Updated 5 years ago
- Efficient storage of same-type, uneven-size arrays☆11Updated 6 years ago
- IPython notebooks with YAML file format☆31Updated 6 years ago
- a nose plugin for finding and running IPython notebooks as nose tests☆80Updated 2 years ago
- Python Optimal Leaf Ordering for Hierarchical Clustering☆21Updated 7 years ago
- [EXPERIMENTAL] pandoc-compatible, Jupyter-aware document conversion library in Python☆51Updated 6 years ago
- Package template for a project using Cython☆58Updated 8 years ago
- Tools to manage jobs on supercomputer☆40Updated 9 years ago
- Allows Jupyter Notebook extension writers to make their extension pip installable!☆38Updated 7 years ago
- Python wrapper around the C DRMAA library.☆109Updated 5 years ago
- ☆37Updated 7 years ago
- like a conda-metapackage but for channels!☆69Updated 3 years ago
- deploy Dask.distributed to GridEngine (sge/pbs) cluster systems☆21Updated 7 years ago
- Providing default representations of common objects in Python land☆20Updated 7 years ago
- Manage traditional HPC cluster workflows in Python☆13Updated 6 years ago
- A pure Python HDF5 file reader☆72Updated last week
- Environment Development Overlays for Conda☆24Updated 3 years ago
- Plugin for pytest to run IPython notebook cells as unit tests☆99Updated 5 years ago
- Prototyping numpy arrays with named axes for data management.☆87Updated last year
- Conventionally parameterized probability distributions☆35Updated last month
- A tool for generating heatmaps from hierarchically clustered data.☆40Updated 6 years ago
- Generate ipywidgets from Parameterized objects in the notebook☆36Updated 4 years ago
- High-level python wapper for the Sun Grid Engine (SGE) using DRMAA and ZMQ☆21Updated 10 years ago
- Command-line tool in Python to explore a HDF5 file☆19Updated 8 years ago
- Submissions of code snippets for the book Elegant SciPy☆13Updated 8 years ago
- Demo project for building and shipping Python conda packages with Appveyor CI and Travis CI☆66Updated 5 years ago
- Adds a customizable menu item to Jupyter (IPython) notebooks to insert boilerplate snippets of code☆70Updated last year