simonsfoundation / jp_gene_vizLinks
A collection of visualizations for genomics related information for use with Jupyter notebooks.
☆10Updated 3 years ago
Alternatives and similar repositories for jp_gene_viz
Users that are interested in jp_gene_viz are comparing it to the libraries listed below
Sorting:
- Tool to easily start up an IPython cluster on different schedulers.☆147Updated 5 years ago
- Deploy Dask on DRMAA clusters☆40Updated 4 years ago
- %conda magic for IPython☆28Updated 8 years ago
- Efficient storage of same-type, uneven-size arrays☆12Updated 6 years ago
- Python wrapper around the C DRMAA library.☆108Updated 6 years ago
- deploy Dask.distributed to GridEngine (sge/pbs) cluster systems☆21Updated 8 years ago
- Python Optimal Leaf Ordering for Hierarchical Clustering☆21Updated 8 years ago
- Run singularity containers on the Comet Supercomputer at San Diego Supercomputer Center☆18Updated 4 years ago
- Execute scripts in their own temporary environment☆72Updated 5 years ago
- Easily map Python functions onto a cluster using a DRMAA-compatible grid engine like Sun Grid Engine (SGE).☆84Updated 2 years ago
- Command-line tool in Python to explore a HDF5 file☆19Updated 9 years ago
- High-level python wapper for the Sun Grid Engine (SGE) using DRMAA and ZMQ☆21Updated 11 years ago
- A general scraper/exporter for matplotlib plots☆48Updated last month
- A demo and tutorial for how to use git and singularity to make your research more portable and reproducible☆26Updated 8 years ago
- like a conda-metapackage but for channels!☆69Updated 4 years ago
- Scripts to launch IPython parallel on a cluster and run an IPython Notebook to run the analysis.☆27Updated 11 years ago
- Package template for a project using Cython☆58Updated 9 years ago
- Connect to a LSF main node directly or trough a ssh jump node, launch a jupyter notebook via bsub and open automatically a tunnel. The n…☆20Updated 3 years ago
- IPython notebooks with YAML file format☆31Updated 7 years ago
- Code for my talk at PyCon 2017☆9Updated 8 years ago
- Repository for Matplotlib Styles (matplotlibrc)☆34Updated 8 years ago
- Teaching numerical methods with IPython notebooks: a tutorial prepared for Scipy 2014☆21Updated 10 years ago
- [EXPERIMENTAL] pandoc-compatible, Jupyter-aware document conversion library in Python☆51Updated 7 years ago
- Simple installer for conda (and conda-likes)☆17Updated last month
- HDF5 Tutorial☆105Updated 10 years ago
- ☆37Updated 8 years ago
- IPython running in a docker container. This image can be used to integrate IPython into Galaxy☆17Updated 9 years ago
- A python library for generating a clustered heatmap with dendrograms.☆32Updated 3 years ago
- Environment Development Overlays for Conda☆24Updated 4 years ago
- 🚧⛔ Tools help with continuous integration on services such as travis-ci and appveyor. (mostly replaced by conda-smithy)☆14Updated 7 years ago