Alternatives and similar repositories for DSA-WSI-DeID

Users that are interested in DSA-WSI-DeID are comparing it to the libraries listed below

• bgilbert / anonymize-slide
  Delete the label from a whole-slide image
  ☆65Updated 4 years ago
• DigitalSlideArchive / HistomicsStream
  A whole-slide image reader for TensorFlow
  ☆24Updated last week
• daangeijs / simple_wsi_viewer
  A simple web application for for viewing and navigating pathology whole-slide-images in your browser.
  ☆15Updated last year
• SarderLab / Histo-cloud
  ☆21Updated 6 months ago
• DigitalSlideArchive / digital_slide_archive
  The official deployment of the Digital Slide Archive and HistomicsTK.
  ☆127Updated last week
• imi-bigpicture / wsidicom
  Python package for reading DICOM WSI file sets.
  ☆44Updated 2 months ago
• John-P / wsic
  Whole Slide image (WSI) conversion for brightfield histology images
  ☆36Updated 2 weeks ago
• choosehappy / QuickAnnotator
  An open-source digital pathology based rapid image annotation tool
  ☆82Updated last month
• DigitalSlideArchive / HistomicsUI
  A Girder plugin for pathology image annotations and analysis.
  ☆74Updated this week
• pearcetm / svs-deidentifier
  Strip potentially identifying label and macro images from Aperio SVS whole slide image files
  ☆35Updated last year
• choosehappy / PatchSorter
  A tool for rapidly labeling objects using deep learning feature embedding
  ☆33Updated this week
• qupath / qupath-extension-wsinfer
  QuPath extension to work with WSInfer - https://wsinfer.readthedocs.io/
  ☆24Updated last month
• RationAI / xopat
  Histopatholical visualization toolkit based on OpenSeaDragon.
  ☆29Updated this week
• AICAN-Research / FAST-Pathology
  ⚡ Open-source software for deep learning-based digital pathology
  ☆135Updated last year
• andreped / NoCodeSeg
  🔬 Code-free deep segmentation for computational pathology
  ☆55Updated last year
• choosehappy / CohortFinder
  Intelligent data partitioning using quality control metrics
  ☆18Updated 2 months ago
• Bayer-Group / tiffslide
  TiffSlide - cloud native openslide-python replacement based on tifffile
  ☆103Updated 3 months ago
• Pathomation / pma_python
  Python wrapper library for PMA.start, a universal viewier for whole slide imaging and microscopy
  ☆32Updated 8 months ago
• DIAGNijmegen / pathology-artifact-detection
  Quality control of whole-slide images through multi-class semantic segmentation of artifacts
  ☆36Updated last year
• imi-bigpicture / wsidicomizer
  Python library for converting WSI files to DICOM
  ☆75Updated this week
• choosehappy / QuPathGeoJSONImportExport
  Coincides with blogpost for using geojson and shapely
  ☆33Updated 4 years ago
• qupath / qupath-extension-omero-web
  QuPath extension to work with images through OMERO's web API
  ☆10Updated last year
• Bayer-Group / paquo
  PAthological QUpath Obsession - QuPath and Python conversations
  ☆121Updated 8 months ago
• maragraziani / interpretAI_DigiPath
  Hands-on Sessions 1 and 2 at the Building Interpretable AI for Digital Pathology AMLD workshop 2021
  ☆22Updated 4 years ago
• mchelali / Color-Deconvolution
  Color Deconvolution for quantification of histological staining
  ☆12Updated 6 years ago
• labsyspharm / orion-crc
  ☆19Updated 2 months ago
• smujiang / Re-stained_WSIs_Registration
  Re-stained whole slide image alignment
  ☆35Updated last year
• DIMAthe47 / slide_viewer_47
  A pyqt5 widget for viewing whole-slide images with Openslide
  ☆22Updated 7 years ago
• SBU-BMI / wsinfer
  🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images
  ☆79Updated last year
• mostafajahanifar / nuclick_torch
  Pytorch implementation of NuClick for interactive cell segmentation
  ☆35Updated last year