Alternatives and similar repositories for DSA-WSI-DeID

Users that are interested in DSA-WSI-DeID are comparing it to the libraries listed below

• bgilbert / anonymize-slide
  Delete the label from a whole-slide image
  ☆65Updated 4 years ago
• imi-bigpicture / wsidicom
  Python package for reading DICOM WSI file sets.
  ☆45Updated 3 weeks ago
• DigitalSlideArchive / HistomicsStream
  A whole-slide image reader for TensorFlow
  ☆24Updated 2 months ago
• DigitalSlideArchive / digital_slide_archive
  The official deployment of the Digital Slide Archive and HistomicsTK.
  ☆130Updated this week
• pearcetm / svs-deidentifier
  Strip potentially identifying label and macro images from Aperio SVS whole slide image files
  ☆36Updated last year
• DigitalSlideArchive / HistomicsUI
  A Girder plugin for pathology image annotations and analysis.
  ☆76Updated last month
• John-P / wsic
  Whole Slide image (WSI) conversion for brightfield histology images
  ☆36Updated last week
• qupath / qupath-extension-omero-web
  QuPath extension to work with images through OMERO's web API
  ☆10Updated last year
• daangeijs / simple_wsi_viewer
  A simple web application for for viewing and navigating pathology whole-slide-images in your browser.
  ☆16Updated 2 years ago
• SarderLab / Histo-cloud
  ☆21Updated 2 months ago
• Pathomation / pma_python
  Python wrapper library for PMA.start, a universal viewier for whole slide imaging and microscopy
  ☆33Updated 11 months ago
• choosehappy / QuPathGeoJSONImportExport
  Coincides with blogpost for using geojson and shapely
  ☆33Updated 5 years ago
• andreped / NoCodeSeg
  🔬 Code-free deep segmentation for computational pathology
  ☆56Updated last year
• choosehappy / QuickAnnotator
  An open-source digital pathology based rapid image annotation tool
  ☆87Updated this week
• Bayer-Group / tiffslide
  TiffSlide - cloud native openslide-python replacement based on tifffile
  ☆103Updated 5 months ago
• RationAI / xopat
  Histopatholical visualization toolkit based on OpenSeaDragon.
  ☆29Updated this week
• qupath / qupath-extension-wsinfer
  QuPath extension to work with WSInfer - https://wsinfer.readthedocs.io/
  ☆26Updated 4 months ago
• tpecot / WholeSlideImageAnalysisWithQuPath
  ☆30Updated 3 weeks ago
• mchelali / Color-Deconvolution
  Color Deconvolution for quantification of histological staining
  ☆12Updated 6 years ago
• clij / clupath
  GPU-accelerated image processing in QuPath
  ☆16Updated 4 years ago
• imi-bigpicture / wsidicomizer
  Python library for converting WSI files to DICOM
  ☆79Updated last month
• Bayer-Group / paquo
  PAthological QUpath Obsession - QuPath and Python conversations
  ☆123Updated 2 months ago
• ksugar / qupath-extension-sam
  QuPath extension for Segment Anything Model (SAM)
  ☆123Updated 3 months ago
• maragraziani / interpretAI_DigiPath
  Hands-on Sessions 1 and 2 at the Building Interpretable AI for Digital Pathology AMLD workshop 2021
  ☆22Updated 4 years ago
• mstritt / orbit-image-analysis
  A versatile image analysis software for biological image-based quantification using machine learning, especially for whole slide imaging.
  ☆59Updated 4 years ago
• AICAN-Research / FAST-Pathology
  ⚡ Open-source software for deep learning-based digital pathology
  ☆139Updated last year
• owkin / histoplus
  ☆53Updated 2 months ago
• SarderLab / extract-xml-region
  A code for extracting annotated regions from whole slide images (WSIs) anotated in Aperio Imagescope
  ☆12Updated 5 years ago
• Booritas / slideio
  ☆72Updated 2 weeks ago
• choosehappy / CohortFinder
  Intelligent data partitioning using quality control metrics
  ☆19Updated 5 months ago