DSLituiev / slideslicer
a toolbox for manipulation of digital pathology slides and annotations
☆19Updated 4 years ago
Related projects ⓘ
Alternatives and complementary repositories for slideslicer
- An optimized pipeline for working with Whole Slide Image (WSI) data in Tensorflow☆15Updated 3 years ago
- Preprocessing module for large histological images☆18Updated last year
- A set of codes to classify H&E slides using deep learning☆28Updated 2 years ago
- Handling whole-slide images with region-level annotations.☆9Updated 5 years ago
- Whole Slide Digital Pathology Image Tissue Localization☆44Updated last year
- Delete the label from a whole-slide image☆58Updated 3 years ago
- Topological Feature Extraction on Whole Slide Images using Graph Neural Networks.☆24Updated 4 years ago
- Re-stained whole slide image alignment☆31Updated last year
- An open-source digital pathology based rapid image annotation tool☆74Updated this week
- WSICS☆29Updated 5 years ago
- HistoClean is a tool for the preprocessing and augmentation of images used in deep learning models. This easy to use application brings…☆27Updated 2 years ago
- Robust quad-tree based registration on whole slide images☆18Updated 4 months ago
- This repository contains work towards HistoVAE: creating meaningful representations of Histopathology images using Variational Autoencode…☆10Updated last year
- A tutorial demonstration of pathml on an example dataset for the manuscript "PathML: A unified framework for WSI analysis with deep learn…☆21Updated 2 years ago
- A Fast Whole-slide image Annotation Tool (FWAT) for conducting painless studies requiring annotations on whole-slide images.☆11Updated 6 years ago
- Quality control of whole-slide images through multi-class semantic segmentation of artifacts☆28Updated 9 months ago
- ☆40Updated 2 years ago
- Suspicious Regions-Based Whole Slide Image Analysis☆10Updated last year
- 🔬 Code-free deep segmentation for computational pathology☆52Updated 4 months ago
- 🚀 H2G-Net: Segmentation of breast cancer region from whole slide images☆22Updated last week
- Region-guided CycleGANs for stain transfer☆15Updated last year
- ☆20Updated 2 years ago
- H&E tailored Randaugment: automatic data augmentation policy selection for H&E-stained histopathology.☆52Updated last year
- ☆43Updated last year
- Framework for registration of sequential digitized histology slices☆28Updated 2 years ago
- GPU-accelerated stain normalization command line tool☆19Updated last year
- This repository contains the implementation of TILAb-score as described in the original paper.☆17Updated 5 years ago
- Tool to visualize gigantic pathology images and use AI to segment cancer cells and present as an overlay☆65Updated last year
- Hands-on Sessions 1 and 2 at the Building Interpretable AI for Digital Pathology AMLD workshop 2021☆21Updated 3 years ago
- Digital Pathology Whole Slide Image Analysis Toolbox☆48Updated last year