DSLituiev / slideslicerView external linksLinks
a toolbox for manipulation of digital pathology slides and annotations
☆19Aug 11, 2020Updated 5 years ago
Alternatives and similar repositories for slideslicer
Users that are interested in slideslicer are comparing it to the libraries listed below
Sorting:
- A code for extracting annotated regions from whole slide images (WSIs) anotated in Aperio Imagescope☆12Jul 3, 2020Updated 5 years ago
- Open source whole slide image preparation and viewing pipeline☆13Mar 16, 2020Updated 5 years ago
- Handling whole-slide images with region-level annotations.☆10Jan 14, 2019Updated 7 years ago
- Codes available of a paper: An Efficient Cervical Whole Slide Image Analysis Framework Based on Multi-scale Semantic and Location Deep Fe…☆16Jul 26, 2022Updated 3 years ago
- ☆18Jan 27, 2025Updated last year
- An optimized pipeline for working with Whole Slide Image (WSI) data in Tensorflow☆14Apr 30, 2021Updated 4 years ago
- Python wrapper library for PMA.start, a universal viewier for whole slide imaging and microscopy☆33Updated this week
- ☆18Oct 12, 2022Updated 3 years ago
- ☆22Apr 16, 2022Updated 3 years ago
- CytoBrowser, a JavaScript and Node.js driven environment for fast and accessible collaborative online visualization, assessment, and anno…☆20Jan 30, 2026Updated 2 weeks ago
- A Python module that produces image patches and annotation masks from whole slide images for deep learning in digital pathology.☆80Jun 21, 2022Updated 3 years ago
- Solid Tumor Associative Modeling in Pathology☆110Updated this week
- A whole-slide image reader for TensorFlow☆24Nov 24, 2025Updated 2 months ago
- A Fast Whole-slide image Annotation Tool (FWAT) for conducting painless studies requiring annotations on whole-slide images.☆11Jun 22, 2018Updated 7 years ago
- Don't mix, match! Simple utilities for improved registration of Histopathology Whole Slide Images.☆11Oct 11, 2020Updated 5 years ago
- Whole Slide Image (WSI) Viewer written in Python (using Qt and OpenSlide)☆10Feb 12, 2020Updated 6 years ago
- H&E ROI-Level and WSI-Level Nuclei Segmentation with HoVer-Net☆10Jul 30, 2024Updated last year
- Code of paper "A Deep Learning based Pipeline for Efficient Oral Cancer Screening on Whole Slide Images"☆11Nov 26, 2021Updated 4 years ago
- ☆68Sep 23, 2024Updated last year
- ⚡ Open-source software for deep learning-based digital pathology☆141Jun 14, 2024Updated last year
- slideToolkit: a free toolset for analyzing full size virtual histology slides☆11May 22, 2024Updated last year
- A .NET microscopy imaging application based on Bio library. Supports various microscopes by using imported libraries & GUI automation. Su…☆17Dec 10, 2025Updated 2 months ago
- Released code for the paper 'End-to-end Multiple Instance Learning for Whole-Slide Cytopathology of Urothelial Carcinoma'☆10Nov 24, 2021Updated 4 years ago
- Whole Slide Digital Pathology Image Tissue Localization☆45Oct 3, 2023Updated 2 years ago
- ☆12Jan 10, 2021Updated 5 years ago
- Full package for applying deep learning to virtual slides.☆72Sep 7, 2018Updated 7 years ago
- HistoClean is a tool for the preprocessing and augmentation of images used in deep learning models. This easy to use application brings…☆32Feb 18, 2022Updated 3 years ago
- Official code for "Improving Self-supervised Learning with Hardness-aware Dynamic Curriculum Learning: An Application to Digital Patholog…☆17Oct 15, 2021Updated 4 years ago
- Python 3 library for the augmentation & normalization of H&E images☆64Sep 12, 2022Updated 3 years ago
- A Python library for deep learning on whole-slide images☆52Nov 5, 2021Updated 4 years ago
- A multi-instance learning on pathological images to predict MSI☆14Sep 30, 2020Updated 5 years ago
- Preprocessing module for large histological images☆21Jun 16, 2023Updated 2 years ago
- H&E tailored Randaugment: automatic data augmentation policy selection for H&E-stained histopathology.☆57Jun 20, 2023Updated 2 years ago
- Digital Pathology Whole Slide Image Analysis Toolbox☆53Apr 2, 2023Updated 2 years ago
- Deep learning enabled assessment of cardiac allograft rejection from endomyocardial biopsies- Nature Medicine☆33May 17, 2022Updated 3 years ago
- Re-stained whole slide image alignment☆36Oct 16, 2023Updated 2 years ago
- NetFrame is a flexible and scalable deep-learning framework to build segmentation model on large scale pathological images.☆13Mar 24, 2023Updated 2 years ago
- Core components of PathologyGo, the AI assistance system designed for histopathological inference.☆15Jun 25, 2020Updated 5 years ago
- Delete the label from a whole-slide image☆65Mar 18, 2021Updated 4 years ago