girder / large_image
Python modules to work with large multiresolution images.
☆203Updated this week
Alternatives and similar repositories for large_image:
Users that are interested in large_image are comparing it to the libraries listed below
- TiffSlide - cloud native openslide-python replacement based on tifffile☆97Updated 3 weeks ago
- Pure Python tools for reading and writing all TIFF IFDs, sub-IFDs, and tags.☆53Updated 3 weeks ago
- A Girder plugin for pathology image annotations and analysis.☆69Updated this week
- A Python toolkit for pathology image analysis algorithms.☆413Updated last week
- Python package for reading DICOM WSI file sets.☆42Updated this week
- The official deployment of the Digital Slide Archive and HistomicsTK.☆118Updated this week
- Interactive Segmentation of Nucleus☆62Updated 2 years ago
- HistoQC is an open-source quality control tool for digital pathology slides☆285Updated 3 months ago
- Python library for converting WSI files to DICOM☆70Updated this week
- A whole-slide image reader for TensorFlow☆23Updated 6 months ago
- Simple pure-python module for reading and writing nrrd files.☆120Updated 2 months ago
- A minimal Zarr image viewer based on Viv.☆142Updated last week
- multimodal whole slide image registration in a graph structure☆82Updated 9 months ago
- N-dimensional NumPy array tiling and merging with overlapping, padding and tapering☆70Updated last year
- BIRL: Benchmark on Image Registration methods with Landmark validations☆92Updated 3 years ago
- Morphological snakes for image segmentation and tracking☆16Updated 5 years ago
- A workflow for redacting PHI from whole slide images (WSI) based on the Digital Slide Archive.☆16Updated 2 weeks ago
- Python bindings to OpenSlide☆386Updated 2 months ago
- Interoperable web-based DICOM slide microscopy viewer and annotation tool☆132Updated last week
- Implementation of next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.☆182Updated last week
- ☆21Updated last month
- Histopatholical visualization toolkit based on OpenSeaDragon.☆28Updated this week
- Next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.☆132Updated this week
- SlideRunner is a tool for massive cell annotations in whole slide images☆77Updated last year
- Delete the label from a whole-slide image☆63Updated 4 years ago
- An ITK ImageIO module for the OpenSlide library.☆11Updated last week
- Python wrapper library for PMA.start, a universal viewier for whole slide imaging and microscopy☆30Updated 3 months ago
- Whole Slide image (WSI) conversion for brightfield histology images☆36Updated last month
- An ITK Python interface to elastix, a toolbox for rigid and nonrigid registration of images☆232Updated last week
- ☆63Updated last week