choosehappy / QuPathGeoJSONImportExportLinks
Coincides with blogpost for using geojson and shapely
☆33Updated 4 years ago
Alternatives and similar repositories for QuPathGeoJSONImportExport
Users that are interested in QuPathGeoJSONImportExport are comparing it to the libraries listed below
Sorting:
- Re-stained whole slide image alignment☆35Updated last year
- 🔬 Code-free deep segmentation for computational pathology☆55Updated last year
- HoVer-Net inference code for simultaneous nuclear segmentation and classification☆68Updated 2 years ago
- An open-source digital pathology based rapid image annotation tool☆82Updated 3 weeks ago
- Python 3 library for the augmentation & normalization of H&E images☆58Updated 2 years ago
- Tool to visualize gigantic pathology images and use AI to segment cancer cells and present as an overlay☆72Updated 7 months ago
- 🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images☆78Updated last year
- Pipeline for computational pathology☆38Updated last year
- ☆20Updated 2 years ago
- NuCLS: A scalable crowdsourcing, deep learning approach and dataset for nucleus classification, localization and segmentation☆54Updated 3 years ago
- The official deployment of the Digital Slide Archive and HistomicsTK.☆127Updated this week
- ☆63Updated 11 months ago
- H&E tailored Randaugment: automatic data augmentation policy selection for H&E-stained histopathology.☆57Updated 2 years ago
- ☆55Updated 3 years ago
- A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.☆105Updated 9 months ago
- Weakly-supervised learning pipeline for histopathology images. Publications: Biomarker prediction in colorectal cancer (CRC)☆81Updated last year
- ☆41Updated 3 years ago
- A pipeline to segment tissue from the background in histological images☆70Updated 2 years ago
- Histopathology Image Analysis☆92Updated 2 years ago
- Virtual Alignment of pathoLogy Image Series☆172Updated 2 months ago
- ⚡ Open-source software for deep learning-based digital pathology☆135Updated last year
- Corresponding code of 'Quiros A.C.+, Coudray N.+, Yeaton A., Yang X., Chiriboga L., Karimkhan A., Narula N., Pass H., Moreira A.L., Le Qu…☆70Updated 6 months ago
- Interactive Segmentation of Nucleus☆66Updated 2 years ago
- A Python library for deep learning on whole-slide images☆53Updated 3 years ago
- Simple library for preprocessing histopathological whole-slide images (WSI) into tiles (a.k.a. patches) towards deep learning☆55Updated last year
- Predicting gastric cancer outcome from resected lymph node histopathology images using deep learning☆36Updated 4 years ago
- ☆35Updated 2 years ago
- A tool for rapidly labeling objects using deep learning feature embedding☆33Updated last year
- Quality control of whole-slide images through multi-class semantic segmentation of artifacts☆36Updated last year
- Image filters for digital pathology: detect pen marks, background, and artifacts. Use them for preprocessing towards deep learning☆28Updated 4 years ago