Alternatives and similar repositories for slideio

Users that are interested in slideio are comparing it to the libraries listed below

• choosehappy / QuickAnnotator
  An open-source digital pathology based rapid image annotation tool
  ☆82Updated last month
• Bayer-Group / paquo
  PAthological QUpath Obsession - QuPath and Python conversations
  ☆121Updated 8 months ago
• DigitalSlideArchive / digital_slide_archive
  The official deployment of the Digital Slide Archive and HistomicsTK.
  ☆127Updated last week
• John-P / wsic
  Whole Slide image (WSI) conversion for brightfield histology images
  ☆36Updated 2 weeks ago
• bgilbert / anonymize-slide
  Delete the label from a whole-slide image
  ☆65Updated 4 years ago
• andreped / NoCodeSeg
  🔬 Code-free deep segmentation for computational pathology
  ☆55Updated last year
• DigitalSlideArchive / HistomicsUI
  A Girder plugin for pathology image annotations and analysis.
  ☆74Updated this week
• SBU-BMI / wsinfer
  🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images
  ☆79Updated last year
• DIAGNijmegen / pathology-artifact-detection
  Quality control of whole-slide images through multi-class semantic segmentation of artifacts
  ☆36Updated last year
• ksugar / qupath-extension-sam
  QuPath extension for Segment Anything Model (SAM)
  ☆117Updated last month
• smujiang / Re-stained_WSIs_Registration
  Re-stained whole slide image alignment
  ☆35Updated last year
• NHPatterson / wsireg
  multimodal whole slide image registration in a graph structure
  ☆92Updated last year
• qupath / qupath-extension-wsinfer
  QuPath extension to work with WSInfer - https://wsinfer.readthedocs.io/
  ☆24Updated last month
• serrob23 / falsecolor
  FalseColor Python is a rapid digital staining module designed for translating two-channel fluorescence images (i.e. a nuclear and cytopla…
  ☆30Updated 4 years ago
• computational-cell-analytics / patho-sam
  Segment Anything for Histopathology
  ☆43Updated 2 months ago
• Bayer-Group / tiffslide
  TiffSlide - cloud native openslide-python replacement based on tifffile
  ☆103Updated 3 months ago
• AICAN-Research / FAST-Pathology
  ⚡ Open-source software for deep learning-based digital pathology
  ☆135Updated last year
• sebastianffx / stainlib
  Python 3 library for the augmentation & normalization of H&E images
  ☆58Updated 2 years ago
• labsyspharm / palom
  Piecewise alignment for layers of mosaics
  ☆29Updated last month
• amspath / slidescape
  ☆26Updated last month
• impromptuRong / hd_wsi
  ☆34Updated 5 months ago
• Pathomation / pma_python
  Python wrapper library for PMA.start, a universal viewier for whole slide imaging and microscopy
  ☆32Updated 8 months ago
• vanvalenlab / cellSAM
  Codebase for "A Foundation Model for Cell Segmentation"
  ☆103Updated this week
• MaryamHaghighat / PathProfiler
  Pipeline for computational pathology
  ☆38Updated last year
• cpath-ukk / grandqc
  GrandQC tool for tissue detection and quality control in pathology
  ☆61Updated 5 months ago
• pearcetm / svs-deidentifier
  Strip potentially identifying label and macro images from Aperio SVS whole slide image files
  ☆35Updated last year
• MathOnco / valis
  Virtual Alignment of pathoLogy Image Series
  ☆172Updated 2 months ago
• computationalpathologygroup / pythostitcher
  Python tool for stitching histopathology tissue fragments into artificial whole-mounts.
  ☆23Updated 5 months ago
• markowetzlab / pathml
  A Python library for deep learning on whole-slide images
  ☆53Updated 3 years ago
• michaellee1 / CellSeg
  ☆23Updated 2 years ago