Booritas / slideioLinks
☆72Updated this week
Alternatives and similar repositories for slideio
Users that are interested in slideio are comparing it to the libraries listed below
Sorting:
- PAthological QUpath Obsession - QuPath and Python conversations☆128Updated 4 months ago
- Delete the label from a whole-slide image☆65Updated 4 years ago
- An open-source digital pathology based rapid image annotation tool☆89Updated last week
- The official deployment of the Digital Slide Archive and HistomicsTK.☆131Updated last week
- QuPath extension for Segment Anything Model (SAM)☆126Updated 5 months ago
- A Girder plugin for pathology image annotations and analysis.☆77Updated 3 weeks ago
- ⚡ Open-source software for deep learning-based digital pathology☆140Updated last year
- 🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images☆84Updated last year
- multimodal whole slide image registration in a graph structure☆97Updated last year
- TiffSlide - cloud native openslide-python replacement based on tifffile☆103Updated 7 months ago
- 🔬 Code-free deep segmentation for computational pathology☆56Updated last year
- Whole Slide image (WSI) conversion for brightfield histology images☆36Updated 3 weeks ago
- Coincides with blogpost for using geojson and shapely☆33Updated 5 years ago
- Virtual Alignment of pathoLogy Image Series☆198Updated 6 months ago
- QuPath extension to work with WSInfer - https://wsinfer.readthedocs.io/☆27Updated 3 weeks ago
- Re-stained whole slide image alignment☆36Updated 2 years ago
- Quality control of whole-slide images through multi-class semantic segmentation of artifacts☆38Updated last year
- A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.☆107Updated last month
- Cloud-based data annotation tools for biological images☆83Updated last year
- FalseColor Python is a rapid digital staining module designed for translating two-channel fluorescence images (i.e. a nuclear and cytopla…☆30Updated 4 years ago
- Pipeline for computational pathology☆37Updated last year
- ☆203Updated 2 weeks ago
- Codebase for "A Foundation Model for Cell Segmentation"☆157Updated last month
- Python tool for stitching histopathology tissue fragments into artificial whole-mounts.☆23Updated 3 weeks ago
- ☆30Updated 2 months ago
- Python wrapper library for PMA.start, a universal viewier for whole slide imaging and microscopy☆33Updated last year
- GrandQC tool for tissue detection and quality control in pathology☆76Updated 9 months ago
- Interactive deep learning whole-cell segmentation and thresholding using partial annotations☆41Updated 2 weeks ago
- A Python library for deep learning on whole-slide images☆53Updated 4 years ago
- GPU-accelerated image processing in QuPath☆16Updated 4 years ago