DigitalSlideArchive / CNNCellDetection
This repository contains adaptations of the state-of-the-art deep learning based object detection models for the detection of cell nuclei in histology images
☆27Updated 2 years ago
Alternatives and similar repositories for CNNCellDetection:
Users that are interested in CNNCellDetection are comparing it to the libraries listed below
- Whole Slide Digital Pathology Image Tissue Localization☆44Updated last year
- WSICS☆30Updated 5 years ago
- Dataset: landmarks for registration of histology images☆32Updated 4 years ago
- A Python module that produces image patches and annotation masks from whole slide images for deep learning in digital pathology.☆78Updated 2 years ago
- ☆35Updated 2 years ago
- This repository contains the code necessary in order to reproduce the work contained in the submitted paper: "Segmentation of Nuclei in H…☆53Updated 5 years ago
- ☆77Updated 4 months ago
- Digital Pathology Whole Slide Image Analysis Toolbox☆48Updated 2 years ago
- Analysis of results of the Data Science Bowl 2018☆21Updated 4 years ago
- Weakly Supervised Mitosis Detection in Breast Histopathology Images using Concentric Loss☆25Updated 5 years ago
- CNN based segmentation codes☆47Updated 2 years ago
- Handling whole-slide images with region-level annotations.☆10Updated 6 years ago
- SlideRunner is a tool for massive cell annotations in whole slide images☆77Updated last year
- A High-Throughput Workflow for Preprocessing, Deep Learning Analytics and Interpretation in Digital Pathology☆40Updated 2 years ago
- Tool to visualize gigantic pathology images and use AI to segment cancer cells and present as an overlay☆71Updated 3 months ago
- Survival Convolutional Neural Networks☆68Updated 2 years ago
- List of academic institutes/companies working on computer-based digital pathology image analysis☆40Updated 2 months ago
- a toolbox for manipulation of digital pathology slides and annotations☆19Updated 4 years ago
- Deep Convolutional Gaussian Mixture Model for Stain-Color Normalization in Histopathological H&E Images☆80Updated 3 years ago
- Full package for applying deep learning to virtual slides.☆68Updated 6 years ago
- Stain normalization parameters used in the paper "F. Ciompi et al., The importance of stain normalization in colorectal tissue classifica…☆28Updated 5 years ago
- Unofficial implementation for ScanNet (a fast WSI prediction method) in PyTorch.☆22Updated last year
- Large-Scale Canine Cutaneous Mast Cell Tumor Dataset for Mitotic Figure Assessment on Whole Slide Images☆29Updated 11 months ago
- Scripts for https://www.nature.com/articles/s41598-018-27707-4, using Convolutional Neural Network to detect lung cancer tumor area☆50Updated 4 years ago
- This is the source code for training and testing our three class CNN algorithm for generalized nuclei segmentation (IEEE TMI paper) using…☆53Updated 5 years ago
- Use streaming to train whole-slides images with single image-level labels, by reducing GPU memory requirements with 99%.☆79Updated 2 years ago
- This repository contains my implementations of the algorithms which we used for evaluation of the MoNuSeg challenge at MICCAI 2018.☆44Updated 3 years ago
- Interactive Segmentation of Nucleus☆62Updated 2 years ago
- An implementation of Unet for pytorch designed for digital pathology segmentation☆123Updated 2 years ago
- 🔬 Code-free deep segmentation for computational pathology☆53Updated 10 months ago