CODAIT / deep-histopathLinks
A deep learning approach to predicting breast tumor proliferation scores for the TUPAC16 challenge
☆209Updated 6 years ago
Alternatives and similar repositories for deep-histopath
Users that are interested in deep-histopath are comparing it to the libraries listed below
Sorting:
- Python package for dealing with whole slide images (.svs) for machine learning, particularly for fast prototyping. Includes patch samplin…☆163Updated last year
- Python Whole Slide Image Preprocessing☆296Updated 3 years ago
- A Python module that produces image patches and annotation masks from whole slide images for deep learning in digital pathology.☆80Updated 3 years ago
- ☆345Updated 4 years ago
- Syntax - the arrangement of whole-slide-images and their image tiles to create well-formed computational pathology pipelines.☆55Updated 3 years ago
- predict microsatellite status from hematoxylin-eosin histology of gastrointestinal cancer☆103Updated 6 years ago
- Whole Slide Digital Pathology Image Tissue Localization☆45Updated 2 years ago
- AI-based pathology predicts origins for cancers of unknown primary - Nature☆177Updated 4 years ago
- An implementation of Unet for pytorch designed for digital pathology segmentation☆126Updated 3 years ago
- HistoQC is an open-source quality control tool for digital pathology slides☆310Updated 2 weeks ago
- Full package for applying deep learning to virtual slides.☆71Updated 7 years ago
- DeepLearning - Camelyon16 dataset☆128Updated 7 years ago
- Code for the Nature Scientific Reports paper "Pathologist-level classification of histologic patterns on resected lung adenocarcinoma sli…☆510Updated last year
- Codes for Fast GPU-Enabled Color Normalization of Whole Slide Images in Digital Pathology☆75Updated 5 years ago
- Pathologist-level interpretable whole-slide cancer diagnosis with deep learning☆131Updated 6 years ago
- Tool to visualize gigantic pathology images and use AI to segment cancer cells and present as an overlay☆74Updated 10 months ago
- HistoSegNet: Semantic Segmentation of Histological Tissue Type in Whole Slide Images (ICCV 2019)☆94Updated 5 years ago
- This repository contains the implementation of TILAb-score as described in the original paper.☆18Updated 6 years ago
- Pretrained model for self supervised histopathology☆120Updated 3 years ago
- A Python toolkit for pathology image analysis algorithms.☆458Updated last week
- H&E histopathological staining normalization☆109Updated 5 years ago
- Scripts for https://www.nature.com/articles/s41598-018-27707-4, using Convolutional Neural Network to detect lung cancer tumor area☆51Updated 4 years ago
- Whole Slide Image segmentation with weakly supervised multiple instance learning on TCGA | MICCAI2020 https://arxiv.org/abs/2004.05024☆142Updated 4 years ago
- A pipeline to segment tissue from the background in histological images☆71Updated 2 years ago
- Tools for tissue image stain normalisation and augmentation in Python 3☆346Updated 4 years ago
- HoVer-Net inference code for simultaneous nuclear segmentation and classification☆70Updated 3 years ago
- Deep Convolutional Gaussian Mixture Model for Stain-Color Normalization in Histopathological H&E Images☆82Updated 4 years ago
- Some stain normalization code☆93Updated 3 years ago
- Corresponding code of 'Quiros A.C., Murray-Smith R., Yuan K. Pathology GAN: Learning deep representations of cancer tissue. Proceedings o…☆98Updated 4 years ago
- Survival Convolutional Neural Networks☆68Updated 2 years ago