imi-bigpicture / wsidicomLinks
Python package for reading DICOM WSI file sets.
☆46Updated 2 weeks ago
Alternatives and similar repositories for wsidicom
Users that are interested in wsidicom are comparing it to the libraries listed below
Sorting:
- Python library for converting WSI files to DICOM☆79Updated this week
- Delete the label from a whole-slide image☆65Updated 4 years ago
- The official deployment of the Digital Slide Archive and HistomicsTK.☆131Updated this week
- A Girder plugin for pathology image annotations and analysis.☆77Updated this week
- A whole-slide image reader for TensorFlow☆24Updated 2 weeks ago
- Interoperable web-based DICOM slide microscopy viewer and annotation tool☆153Updated 2 weeks ago
- Conversion tool/library for converting whole slide images to DICOM☆86Updated 10 months ago
- TiffSlide - cloud native openslide-python replacement based on tifffile☆103Updated 6 months ago
- An open-source digital pathology based rapid image annotation tool☆88Updated 2 weeks ago
- Whole Slide image (WSI) conversion for brightfield histology images☆36Updated this week
- ⚡ Open-source software for deep learning-based digital pathology☆139Updated last year
- Quality control of whole-slide images through multi-class semantic segmentation of artifacts☆38Updated last year
- ☆72Updated last week
- HistoQC is an open-source quality control tool for digital pathology slides☆312Updated 2 weeks ago
- Python wrapper library for PMA.start, a universal viewier for whole slide imaging and microscopy☆33Updated 11 months ago
- 🔬 Code-free deep segmentation for computational pathology☆56Updated last year
- PAthological QUpath Obsession - QuPath and Python conversations☆126Updated 3 months ago
- 🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images☆84Updated last year
- ☆21Updated 2 months ago
- Whole Slide Digital Pathology Image Tissue Localization☆45Updated 2 years ago
- ☆37Updated 8 months ago
- ☆92Updated 6 months ago
- Histopatholical visualization toolkit based on OpenSeaDragon.☆29Updated last week
- Coincides with blogpost for using geojson and shapely☆33Updated 5 years ago
- ☆13Updated 5 months ago
- A Girder plugin for exposing slicer execution model's CLI modules over the web☆18Updated 2 months ago
- 3D Slicer module for browsing and downloading medical imaging collections from The Cancer Imaging Archive (TCIA).☆19Updated last month
- A simple web application for for viewing and navigating pathology whole-slide-images in your browser.☆16Updated 2 years ago
- High-level DICOM abstractions for the Python programming language☆211Updated last week
- An ITK Python interface to elastix, a toolbox for rigid and nonrigid registration of images☆258Updated 3 months ago