imi-bigpicture / wsidicomLinks
Python package for reading DICOM WSI file sets.
☆45Updated this week
Alternatives and similar repositories for wsidicom
Users that are interested in wsidicom are comparing it to the libraries listed below
Sorting:
- Python library for converting WSI files to DICOM☆78Updated 2 weeks ago
- Delete the label from a whole-slide image☆65Updated 4 years ago
- A Girder plugin for pathology image annotations and analysis.☆75Updated 2 weeks ago
- The official deployment of the Digital Slide Archive and HistomicsTK.☆130Updated last week
- Interoperable web-based DICOM slide microscopy viewer and annotation tool☆144Updated last week
- Conversion tool/library for converting whole slide images to DICOM☆84Updated 9 months ago
- TiffSlide - cloud native openslide-python replacement based on tifffile☆103Updated 5 months ago
- An open-source digital pathology based rapid image annotation tool☆86Updated this week
- ⚡ Open-source software for deep learning-based digital pathology☆138Updated last year
- A whole-slide image reader for TensorFlow☆24Updated last month
- HistoQC is an open-source quality control tool for digital pathology slides☆306Updated last week
- A workflow for redacting PHI from whole slide images (WSI) based on the Digital Slide Archive.☆17Updated this week
- Quality control of whole-slide images through multi-class semantic segmentation of artifacts☆38Updated last year
- Whole Slide image (WSI) conversion for brightfield histology images☆36Updated last week
- ☆72Updated last month
- Histopatholical visualization toolkit based on OpenSeaDragon.☆29Updated this week
- A versatile image analysis software for biological image-based quantification using machine learning, especially for whole slide imaging.☆59Updated 4 years ago
- 🔬 Code-free deep segmentation for computational pathology☆56Updated last year
- ☆21Updated last month
- Whole Slide Digital Pathology Image Tissue Localization☆45Updated 2 years ago
- Cytomine Community Edition Legacy☆35Updated 3 weeks ago
- High-level DICOM abstractions for the Python programming language☆208Updated last week
- Python wrapper library for PMA.start, a universal viewier for whole slide imaging and microscopy☆33Updated 10 months ago
- Tool to visualize gigantic pathology images and use AI to segment cancer cells and present as an overlay☆73Updated 9 months ago
- SlideRunner is a tool for massive cell annotations in whole slide images☆79Updated 3 months ago
- 3D Slicer module for browsing and downloading medical imaging collections from The Cancer Imaging Archive (TCIA).☆19Updated last week
- Build, package, test, and run 3D Slicer and Slicer Extensions in Docker.☆66Updated this week
- Extension to QuPath application adding support for reading from Google Cloud Healthcare API.☆23Updated 3 years ago
- A Python toolkit for pathology image analysis algorithms.☆452Updated this week
- Python package for dealing with whole slide images (.svs) for machine learning, particularly for fast prototyping. Includes patch samplin…☆164Updated last year