Alternatives and similar repositories for wsidicom

Users that are interested in wsidicom are comparing it to the libraries listed below

• imi-bigpicture / wsidicomizer
  Python library for converting WSI files to DICOM
  ☆78Updated 2 weeks ago
• GoogleCloudPlatform / wsi-to-dicom-converter
  Conversion tool/library for converting whole slide images to DICOM
  ☆84Updated 9 months ago
• DigitalSlideArchive / HistomicsUI
  A Girder plugin for pathology image annotations and analysis.
  ☆75Updated 2 weeks ago
• bgilbert / anonymize-slide
  Delete the label from a whole-slide image
  ☆65Updated 4 years ago
• ImagingDataCommons / slim
  Interoperable web-based DICOM slide microscopy viewer and annotation tool
  ☆144Updated last week
• DigitalSlideArchive / digital_slide_archive
  The official deployment of the Digital Slide Archive and HistomicsTK.
  ☆130Updated last week
• DigitalSlideArchive / DSA-WSI-DeID
  A workflow for redacting PHI from whole slide images (WSI) based on the Digital Slide Archive.
  ☆17Updated this week
• Bayer-Group / tiffslide
  TiffSlide - cloud native openslide-python replacement based on tifffile
  ☆103Updated 5 months ago
• AICAN-Research / FAST-Pathology
  ⚡ Open-source software for deep learning-based digital pathology
  ☆138Updated last year
• choosehappy / QuickAnnotator
  An open-source digital pathology based rapid image annotation tool
  ☆86Updated 3 weeks ago
• DIAGNijmegen / pathology-artifact-detection
  Quality control of whole-slide images through multi-class semantic segmentation of artifacts
  ☆38Updated last year
• choosehappy / HistoQC
  HistoQC is an open-source quality control tool for digital pathology slides
  ☆306Updated last week
• DigitalSlideArchive / HistomicsStream
  A whole-slide image reader for TensorFlow
  ☆24Updated last month
• Booritas / slideio
  ☆72Updated last month
• sectra-medical / pydicomutils
  ☆13Updated 4 months ago
• John-P / wsic
  Whole Slide image (WSI) conversion for brightfield histology images
  ☆36Updated last week
• SarderLab / Histo-cloud
  ☆21Updated last month
• PingjunChen / tissueloc
  Whole Slide Digital Pathology Image Tissue Localization
  ☆45Updated 2 years ago
• RationAI / xopat
  Histopatholical visualization toolkit based on OpenSeaDragon.
  ☆29Updated this week
• mstritt / orbit-image-analysis
  A versatile image analysis software for biological image-based quantification using machine learning, especially for whole slide imaging.
  ☆59Updated 4 years ago
• ImagingDataCommons / highdicom
  High-level DICOM abstractions for the Python programming language
  ☆208Updated last week
• Slicer / SlicerDocker
  Build, package, test, and run 3D Slicer and Slicer Extensions in Docker.
  ☆66Updated this week
• girder / slicer_cli_web
  A Girder plugin for exposing slicer execution model's CLI modules over the web
  ☆18Updated last month
• GoogleCloudPlatform / qupath-chcapi-extension
  Extension to QuPath application adding support for reading from Google Cloud Healthcare API.
  ☆23Updated 3 years ago
• DICOMWG26AnnotationAHG / hackathon
  DICOM WG-26 Annotation Hackathon
  ☆26Updated 4 years ago
• innolitics / dicom-numpy
  Properly generate a 3D numpy array from a set of DICOM files.
  ☆95Updated 2 years ago
• cytomine / Cytomine-bootstrap
  Cytomine Community Edition Legacy
  ☆35Updated 3 weeks ago
• DeepMicroscopy / SlideRunner
  SlideRunner is a tool for massive cell annotations in whole slide images
  ☆79Updated 3 months ago
• razorx89 / pydicom-seg
  Python package for DICOM-SEG medical segmentation file reading and writing
  ☆85Updated 2 years ago
• Pathomation / pma_python
  Python wrapper library for PMA.start, a universal viewier for whole slide imaging and microscopy
  ☆33Updated 10 months ago