smujiang / Re-stained_WSIs_RegistrationLinks
Re-stained whole slide image alignment
☆34Updated last year
Alternatives and similar repositories for Re-stained_WSIs_Registration
Users that are interested in Re-stained_WSIs_Registration are comparing it to the libraries listed below
Sorting:
- HoVer-Net inference code for simultaneous nuclear segmentation and classification☆68Updated 2 years ago
- Pipeline for computational pathology☆38Updated last year
- Predicting gastric cancer outcome from resected lymph node histopathology images using deep learning☆36Updated 4 years ago
- NuCLS: A scalable crowdsourcing, deep learning approach and dataset for nucleus classification, localization and segmentation☆54Updated 3 years ago
- Code from Foersch et al. (Under Construction / Development)☆37Updated 2 years ago
- 🔬 Code-free deep segmentation for computational pathology☆54Updated last year
- Histomic Prognostic Signature (HiPS): A population-level computational histologic signature for invasive breast cancer prognosis☆30Updated last year
- Virtual Alignment of pathoLogy Image Series☆171Updated last month
- ☆41Updated 3 years ago
- ☆20Updated 2 years ago
- ☆55Updated 3 years ago
- Coincides with blogpost for using geojson and shapely☆33Updated 4 years ago
- Histopathology Image Analysis☆92Updated 2 years ago
- Corresponding code of 'Quiros A.C.+, Coudray N.+, Yeaton A., Yang X., Chiriboga L., Karimkhan A., Narula N., Pass H., Moreira A.L., Le Qu…☆68Updated 6 months ago
- Weakly-supervised learning pipeline for histopathology images. Publications: Biomarker prediction in colorectal cancer (CRC)☆80Updated last year
- Python 3 library for the augmentation & normalization of H&E images☆58Updated 2 years ago
- A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.☆104Updated 8 months ago
- GPU-accelerated stain normalization command line tool☆22Updated last year
- H&E histopathological staining normalization☆109Updated 5 years ago
- Amgad M, Salgado R, Cooper LA. A panoptic segmentation approach for tumor-infiltrating lymphocyte assessment: development of the MuTILs m…☆23Updated 2 months ago
- Image filters for digital pathology: detect pen marks, background, and artifacts. Use them for preprocessing towards deep learning☆28Updated 4 years ago
- ☆54Updated 2 years ago
- ☆35Updated 2 years ago
- Tool to visualize gigantic pathology images and use AI to segment cancer cells and present as an overlay☆72Updated 6 months ago
- ☆62Updated 10 months ago
- Image-translation-assisted segmentation in 3D☆26Updated 3 years ago
- This repository contains the implementation of TILAb-score as described in the original paper.☆18Updated 5 years ago
- Exploring prognostic indicators in pathological images of hepatocellular carcinoma based on deep learning☆44Updated 4 years ago
- GrandQC tool for tissue detection and quality control in pathology☆57Updated 5 months ago
- Code and GUI for Feature-driven Local Cell Graph (FLocK): New Computational Pathology based descriptors☆16Updated 2 years ago