☆59Nov 7, 2025Updated 5 months ago
Alternatives and similar repositories for NA-MPNN
Users that are interested in NA-MPNN are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆16Mar 28, 2025Updated last year
- ☆12Feb 7, 2023Updated 3 years ago
- Expert-Guided Protein Language Models enable Accurate and Blazingly Fast Fitness Prediction☆17Feb 6, 2026Updated 2 months ago
- Evolla: A frontier protein-language generative model designed to decode the molecular language of proteins.☆65Updated this week
- ☆26Oct 8, 2024Updated last year
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Graphical Representation of Ancestral Sequence Predictions☆12Mar 6, 2023Updated 3 years ago
- FeNNol Pretrained Models Collection☆21Dec 17, 2025Updated 3 months ago
- A dataset for training and benchmarking deep learning models for RNA structure prediction☆65Apr 3, 2026Updated last week
- SableBind is an open-source framework dedicated to predicting protein-ligand binding affinity☆13Feb 6, 2025Updated last year
- Home of the public Martini 3 lipid parameters☆24Sep 29, 2025Updated 6 months ago
- p-IgGen: A Generative Paired Antibody Language Model☆13May 6, 2025Updated 11 months ago
- Library to extract embeddings for DNA sequences using BioFM genomics foundation model☆19Aug 13, 2025Updated 8 months ago
- Making Protein Language Modeling Accessible to All Biologists☆159Updated this week
- Algorithm for identifying hydrogen bond networks in CG proteins to implement Go-like Martini 3 models☆16Oct 25, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A protein structure dataset that combines 3D atomic coordinates with biophysical and evolutionary properties for every atom in every "cle…☆39Jul 25, 2024Updated last year
- Clustering tool for biomolecular structural ensembles and data in general.☆10Aug 24, 2020Updated 5 years ago
- CArbohydrate-Protein Site IdentiFier☆16Aug 22, 2023Updated 2 years ago
- ☆43Oct 1, 2023Updated 2 years ago
- ProtMamba: a homology-aware but alignment-free protein state space model☆85Jun 3, 2025Updated 10 months ago
- Graphormer Based Protein Sequence Design☆26Feb 2, 2024Updated 2 years ago
- ☆62Apr 9, 2024Updated 2 years ago
- Some ideas on methods for comparing classification models☆10May 17, 2020Updated 5 years ago
- Markov State Models on the Muller potential: a MSMBuilder Tutorial☆12Mar 18, 2013Updated 13 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Some scoring functions for predicting the effects of mutations on protein sequences using ESM-2☆11Dec 10, 2023Updated 2 years ago
- ☆13Apr 9, 2026Updated last week
- Code for designing biased protein states☆77Feb 13, 2026Updated 2 months ago
- ProTrek: illuminating the Protein Universe through Trimodal Protein Language Model☆203Feb 14, 2026Updated 2 months ago
- Helper function for Markov State Models☆11Jun 25, 2024Updated last year
- ☆31Dec 12, 2024Updated last year
- Method for constructing embeddings of GO terms.☆14Nov 25, 2021Updated 4 years ago
- Co-processor for whole genome alignment☆13Jun 6, 2020Updated 5 years ago
- Python code to automatically interact with PDBePISA web server☆10Jun 27, 2022Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Collective variables by artificial neural networks☆10Mar 16, 2022Updated 4 years ago
- ☆10Apr 1, 2024Updated 2 years ago
- A python package and collection of scripts for computing protein surface meshes, chemical, electrostatic, geometric features, and buildin…☆27Jul 15, 2025Updated 9 months ago
- Deep learning based alignment-free method for protein family modeling and prediction☆16Jul 31, 2018Updated 7 years ago
- Code for ICML 2021 paper "Regularizing towards Causal Invariance: Linear Models with Proxies" (ICML 2021)☆11Mar 14, 2022Updated 4 years ago
- Knowledge graph enhanced LLM for binding affinity prediction☆14Aug 20, 2024Updated last year
- ☆33Feb 5, 2025Updated last year