☆63May 13, 2026Updated last month
Alternatives and similar repositories for NA-MPNN
Users that are interested in NA-MPNN are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆15Mar 28, 2025Updated last year
- ☆12Feb 7, 2023Updated 3 years ago
- ☆28May 26, 2026Updated last month
- Expert-Guided Protein Language Models enable Accurate and Blazingly Fast Fitness Prediction☆17Feb 6, 2026Updated 5 months ago
- A python package and collection of scripts for computing protein surface meshes, chemical, electrostatic, geometric features, and buildin…☆27Jul 15, 2025Updated 11 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Utility scripts to generate and evaluate parametrically guided beta barrel protein backbone structures.☆13Nov 14, 2025Updated 7 months ago
- Evolla: A frontier protein-language generative model designed to decode the molecular language of proteins.☆69Apr 13, 2026Updated 2 months ago
- ☆26Oct 8, 2024Updated last year
- A conditionally adapted protein language model for the generation of enzymes☆24Nov 26, 2024Updated last year
- Aligning protein generative models with experimental fitness☆124Mar 12, 2026Updated 3 months ago
- FeNNol Pretrained Models Collection☆21Dec 17, 2025Updated 6 months ago
- This is the official code repository for the paper FLOP: Tasks for Fitness Landscapes Of Protein wildtypes by Groth et al.☆22Jun 26, 2023Updated 3 years ago
- A dataset for training and benchmarking deep learning models for RNA structure prediction☆67May 8, 2026Updated last month
- All-atom protein generation using latent diffusion, with compositional function and taxonomic prompts. http://bit.ly/plaid-proteins☆127May 27, 2025Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Graphical Representation of Ancestral Sequence Predictions☆14Mar 6, 2023Updated 3 years ago
- Step-by-step guide to install and configure AlphaFold 3 using a Conda Python 3.11 environment. No system-wide installations required. ✅ …☆49May 14, 2026Updated last month
- SableBind is an open-source framework dedicated to predicting protein-ligand binding affinity☆13Feb 6, 2025Updated last year
- p-IgGen: A Generative Paired Antibody Language Model☆13May 6, 2025Updated last year
- Protein-Nucleic Acid Complex Modeling with Frame Averaging Transformer, NeurIPS2024☆28May 27, 2025Updated last year
- Home of the public Martini 3 lipid parameters☆28Sep 29, 2025Updated 9 months ago
- Library to extract embeddings for DNA sequences using BioFM genomics foundation model☆21Aug 13, 2025Updated 10 months ago
- Making Protein Language Modeling Accessible to All Biologists☆166Jun 25, 2026Updated last week
- A protein structure dataset that combines 3D atomic coordinates with biophysical and evolutionary properties for every atom in every "cle…☆38Jul 25, 2024Updated last year
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Algorithm for identifying hydrogen bond networks in CG proteins to implement Go-like Martini 3 models☆17Oct 25, 2024Updated last year
- Clustering tool for biomolecular structural ensembles and data in general.☆10Aug 24, 2020Updated 5 years ago
- CArbohydrate-Protein Site IdentiFier☆16Aug 22, 2023Updated 2 years ago
- ☆43Oct 1, 2023Updated 2 years ago
- ProtMamba: a homology-aware but alignment-free protein state space model☆89Jun 3, 2025Updated last year
- ☆63Apr 9, 2024Updated 2 years ago
- Some ideas on methods for comparing classification models☆10May 17, 2020Updated 6 years ago
- Identifies duplicate reads. This tool locates and tags duplicate reads in a coordinate ordered SAM or BAM file.☆24Jan 21, 2026Updated 5 months ago
- Markov State Models on the Muller potential: a MSMBuilder Tutorial☆12Mar 18, 2013Updated 13 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Some scoring functions for predicting the effects of mutations on protein sequences using ESM-2☆12Dec 10, 2023Updated 2 years ago
- ☆113Updated this week
- ProTrek: illuminating the Protein Universe through Trimodal Protein Language Model (Connecting text and protein)☆208May 15, 2026Updated last month
- ☆15Apr 9, 2026Updated 2 months ago
- Helper function for Markov State Models☆11Jun 25, 2024Updated 2 years ago
- Code for designing biased protein states☆82Apr 15, 2026Updated 2 months ago
- ☆31Dec 12, 2024Updated last year