SableBind is an open-source framework dedicated to predicting protein-ligand binding affinity
☆13Feb 6, 2025Updated last year
Alternatives and similar repositories for SableBind
Users that are interested in SableBind are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Combines FRESEAN mode analysis of a protein (based on a CG representation) with enhanced sampling using metadynamics☆17May 7, 2026Updated 3 months ago
- Community-contributed extensions to the Chemprop machine learning package☆21May 12, 2026Updated 2 months ago
- Flexibility-conditioned protein structure design☆36Mar 10, 2026Updated 4 months ago
- GatorAffinity: Boosting Protein-Ligand Binding Affinity Prediction with Large-Scale Synthetic Structural Data☆35Apr 10, 2026Updated 4 months ago
- Lightweight induced fit docking☆22May 22, 2023Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Biasing Conformational Sampling in AlphaFold 3 and Boltz-2 via Pair Representation Scaling☆29Jul 6, 2026Updated last month
- Code for running BinderFlow☆66Jun 22, 2026Updated last month
- ☆12Sep 17, 2024Updated last year
- PREVENT: PRotein Engineering by Variational frEe eNergy approximaTion☆13Jul 4, 2024Updated 2 years ago
- FeatureDock is a protein-ligand docking software guided by physicochemical feature-based local environment learning using Transformer☆42Oct 9, 2024Updated last year
- Metadiffusion implemented in Boltz-2☆24Feb 23, 2026Updated 5 months ago
- Semantic Segmentor for Protein Structures.☆11Dec 20, 2021Updated 4 years ago
- P2DFlow: A Protein Ensemble Generative Model with SE(3) Flow Matching☆46May 22, 2025Updated last year
- Fast protein backbone flexibility prediction model☆36Jan 4, 2026Updated 7 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Python package for handling ModelCIF mmCIF and BinaryCIF files☆14Jul 24, 2026Updated 2 weeks ago
- Algorithm for identifying hydrogen bond networks in CG proteins to implement Go-like Martini 3 models☆17Oct 25, 2024Updated last year
- Physics-Guided All-Atom Diffusion Model for Accurate Protein-Ligand Complex Prediction☆93Oct 6, 2025Updated 10 months ago
- ☆27May 16, 2026Updated 2 months ago
- MM-PBSA method for GROMACS. For full description, please visit homepage:☆15Aug 1, 2026Updated last week
- PyRosetta4 v2026-02-06 with (Global Interpreter Lock) disabled☆20Mar 22, 2026Updated 4 months ago
- ☆18Jan 15, 2026Updated 6 months ago
- Enzyme kinetics data extraction pipeline☆17Jul 17, 2026Updated 3 weeks ago
- A comprehensive resource of binding sites on human surface proteins with binder seeds☆15Feb 26, 2025Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- peptide-MHC modeling, binding prediction, and protein design.☆32Jul 24, 2026Updated 2 weeks ago
- Code for the paper "Learning to engineer protein flexibility".☆22Mar 24, 2026Updated 4 months ago
- Software for automated molecular dynamics studies☆117Updated this week
- Deep generative modeling of protein structural ensembles☆41May 27, 2026Updated 2 months ago
- Protein discovery tool for mining in the Alphafold database based on the position of few amino acids.☆33Jun 25, 2026Updated last month
- ☆13Jul 23, 2020Updated 6 years ago
- FeNNol Pretrained Models Collection☆21Dec 17, 2025Updated 7 months ago
- Rapid Generation of Rare Event Pathways Using Direction Guided Adaptive Sampling: From Ligand Unbinding to Protein (Un)Folding☆38Aug 2, 2026Updated last week
- ☆46Dec 30, 2025Updated 7 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- off-targeting assessment of Cas9 gRNAs☆15Apr 27, 2021Updated 5 years ago
- ☆20Nov 24, 2025Updated 8 months ago
- Rank binders by structure modeling☆17Apr 10, 2026Updated 4 months ago
- ☆19Aug 31, 2025Updated 11 months ago
- One protein is all you need (ICLR 2026)☆115Aug 1, 2026Updated last week
- DynamicGT: a dynamic-aware geometric transformer model to predict protein binding interfaces in flexible and disordered regions☆16Jun 18, 2026Updated last month
- Masked Omics Modeling for Multimodal Representation Learning across Histopathology and Molecular Profiles☆17Jul 29, 2026Updated last week