Knowledge graph enhanced LLM for binding affinity prediction
☆14Aug 20, 2024Updated last year
Alternatives and similar repositories for AntiFormer
Users that are interested in AntiFormer are comparing it to the libraries listed below
Sorting:
- ☆15Jan 5, 2024Updated 2 years ago
- This is the official repository of paper - GeoAB: Towards Realistic Antibody Design and Reliable Affinity Maturation (ICML2024)☆43Jun 17, 2024Updated last year
- Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.☆61Oct 25, 2023Updated 2 years ago
- Epitope Prediction Pipeline and analysis tools built around AlphaFold 2☆20May 9, 2024Updated last year
- Gene Expression Prediction from Histology Images via Hypergraph Neural Networks☆15May 19, 2025Updated 10 months ago
- BindCraft modified to make PyRosetta use and installation optional: no license needed☆125Nov 30, 2025Updated 3 months ago
- convert .kfb format whole slide images to .svs format image for further processing☆16Sep 19, 2020Updated 5 years ago
- AbBFN2: A flexible antibody foundation model based on Bayesian Flow Networks☆38Jun 4, 2025Updated 9 months ago
- ☆42Nov 29, 2025Updated 3 months ago
- Source code for the BUDE Alanine Scan web application.☆12May 27, 2025Updated 9 months ago
- p-IgGen: A Generative Paired Antibody Language Model☆13May 6, 2025Updated 10 months ago
- Updated Protpardelle models with more robust motif scaffolding and multichain support☆72Mar 7, 2026Updated last week
- DSResSol: A sequence-based solubility predictor created with Dilated Squeeze Excitation Residual Networks☆11May 30, 2024Updated last year
- ☆12Dec 2, 2024Updated last year
- A biological dual-language foundation model☆12Jun 16, 2025Updated 9 months ago
- The Official PyTorch Implementation of "Poisson Variational Autoencoder" (NeurIPS 2024 Spotlight Paper)☆23Feb 6, 2026Updated last month
- ☆13Feb 20, 2022Updated 4 years ago
- ☆17Jun 20, 2025Updated 9 months ago
- AIRFold Protein Structure Prediction System☆11Mar 24, 2025Updated 11 months ago
- ☆25Feb 4, 2025Updated last year
- ☆18May 30, 2025Updated 9 months ago
- ☆20Aug 7, 2023Updated 2 years ago
- A easy-to-use Python API for Primer3 primer design.☆16Nov 10, 2022Updated 3 years ago
- Learning Binding Affinities via Fine-tuning of Protein and Ligand Language Models☆39Dec 5, 2024Updated last year
- ☆76Oct 23, 2024Updated last year
- ☆10Apr 1, 2024Updated last year
- P2PXML: Deep Geometric Framework to Predict Antibody-Antigen Binding Affinity (Journal of Structural Biology)☆13Feb 24, 2026Updated 3 weeks ago
- [ISBI25] Fine-tuning of foundation models with LoRA for cytology classification☆28Mar 7, 2025Updated last year
- This is a GitHub Repository containing the data and code used for a thorough comparison of 11 ligand binding site prediction tools☆17Nov 19, 2024Updated last year
- ☆19Mar 16, 2025Updated last year
- ☆19Jun 27, 2024Updated last year
- PPI version of Pythia☆27Sep 12, 2025Updated 6 months ago
- ☆16Dec 10, 2025Updated 3 months ago
- ☆39Jan 19, 2026Updated 2 months ago
- ☆83Oct 23, 2025Updated 4 months ago
- ☆24May 26, 2025Updated 9 months ago
- Discriminator for Model Docking☆11Dec 20, 2024Updated last year
- ☆59Nov 7, 2025Updated 4 months ago
- Code for generating model and predictions for CAFA5 competition 2023 (4th place solution)☆18May 24, 2024Updated last year