☆42Aug 29, 2025Updated 6 months ago
Alternatives and similar repositories for PGP
Users that are interested in PGP are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- protein backbone refinement☆15Sep 12, 2024Updated last year
- ProtSpace is program that helps in visualizing and investigating our protein embedding space.☆46Updated this week
- A compilation of deep learning methods for protein design☆97Nov 5, 2022Updated 3 years ago
- Meta learning addresses noisy and under-labeled data in machine learning-guided antibody engineering (https://doi.org/10.1016/j.cels.2023…☆22Aug 8, 2024Updated last year
- [NeurIPS 2025 spotlight] Efficient factorized variant of the IPA module.☆46Nov 14, 2025Updated 4 months ago
- This repository contains a set of scripts for performing singular value decomposition on protein multiple sequence alignments, and analyz…☆11Aug 12, 2024Updated last year
- ☆20Feb 25, 2025Updated last year
- Code for our paper "Protein sequence design with a learned potential"☆34Aug 5, 2021Updated 4 years ago
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆72Feb 21, 2026Updated last month
- De Novo Protein Design by Equivariantly Diffusing Oriented Residue Clouds☆186Apr 21, 2024Updated last year
- ☆65Sep 14, 2023Updated 2 years ago
- Multiple Protein Structure Alignment at Scale with FoldMason☆264Jan 31, 2026Updated last month
- LatentDE: Latent-based Directed Evolution for Protein Sequence Design☆38Apr 2, 2025Updated 11 months ago
- Graph neural network for generating novel amino acid sequences that fold into proteins with predetermined topologies.☆60Mar 24, 2021Updated 4 years ago
- ☆15Mar 28, 2025Updated 11 months ago
- A simplified implementation of DSSP algorithm for PyTorch and NumPy☆98Jun 9, 2025Updated 9 months ago
- Sandbox for Deep-Learning based Computational Protein Design☆119Dec 11, 2025Updated 3 months ago
- Implementation of Protein Invariant Point Packer (PIPPack)☆35May 28, 2024Updated last year
- ☆17Dec 23, 2024Updated last year
- Learning Protein Constitutive Motifs from Sequence Data: RBM toolbox☆20Jan 30, 2019Updated 7 years ago
- Pretrained METL models with minimal dependencies☆17Sep 18, 2025Updated 6 months ago
- Explore protein fold space with deep generative models☆16Aug 5, 2024Updated last year
- ☆16Dec 10, 2024Updated last year
- Code for holographic machine learning of proteins☆24Oct 29, 2024Updated last year
- ☆130Mar 10, 2026Updated last week
- Protein Sequence Design with Deep Learning and Tooling like Monte Carlo Sampling and Analysis☆63Oct 28, 2025Updated 4 months ago
- Generative diverse protein backbones by protein language model☆34Feb 27, 2026Updated 3 weeks ago
- A series of scripts that facilitate the prediction of user-defined protein structural properties using AlphaFold2☆11Aug 28, 2023Updated 2 years ago
- Fully convolutional deep learning variant effect predictor architecture☆23Jan 3, 2024Updated 2 years ago
- Protein hallucination and inpainting with RoseTTAFold☆280Mar 30, 2023Updated 2 years ago
- Code and software used to design de novo protein nanomachines. Supplementary material for "Computational design of nanoscale rotational m…☆10Mar 19, 2022Updated 4 years ago
- A protein structure dataset that combines 3D atomic coordinates with biophysical and evolutionary properties for every atom in every "cle…☆39Jul 25, 2024Updated last year
- RITA is a family of autoregressive protein models, developed by LightOn in collaboration with the OATML group at Oxford and the Debora Ma…☆98Jan 24, 2023Updated 3 years ago
- Official code release for Ambient Protein Diffusion☆32Aug 30, 2025Updated 6 months ago
- Protein folding in Pymol☆143Nov 23, 2025Updated 4 months ago
- A collection of *fold* tools☆24Nov 10, 2022Updated 3 years ago
- Fast protein domain structure embedding+search tool☆27Sep 21, 2025Updated 6 months ago
- Automated construction of protein chimeras and their analysis.☆14Sep 29, 2023Updated 2 years ago
- Predicting the effect of mutations on protein stability using a simple orientational potential.☆19Jul 5, 2024Updated last year