ComputationalBiologyLab-IIITH / HYDRALinks
☆10Updated last year
Alternatives and similar repositories for HYDRA
Users that are interested in HYDRA are comparing it to the libraries listed below
Sorting:
- Guiding diffusion models for antibody sequence and structure co-design with developability properties.☆35Updated last year
- scripts to find PBD structures for cancer driver proteins☆31Updated last month
- Utility scripts to generate and evaluate parametrically guided beta barrel protein backbone structures.☆13Updated last month
- ☆25Updated 7 months ago
- ☆15Updated 7 months ago
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆33Updated 2 years ago
- Protein Sequence Evolutionary Information Language Model☆13Updated 2 years ago
- Building more accurate protein structures from backbone torsion angles☆14Updated 9 months ago
- Molecular dynamics without molecules: searching the conformational space of proteins with generative neural networks☆11Updated 3 years ago
- PackDock: a Diffusion Based Side Chain Packing Model for Flexible Protein-Ligand Docking☆46Updated 2 months ago
- Fold Conditioned protein design pipeline based on AF2Multimer Hallucination☆46Updated last month
- Graphormer Based Protein Sequence Design☆26Updated last year
- Modelling protein conformational landscape with Alphafold☆54Updated 4 months ago
- bakerlab pymol scripts☆25Updated 5 years ago
- ☆29Updated last year
- Binding pocket optimization based on force fields and docking scoring functions☆37Updated 9 months ago
- Precise Generation of Conformational Ensembles for Intrinsically Disordered Proteins with IDPFold☆25Updated last year
- ☆45Updated last month
- This repository contains the AlphaCutter.py for the removal of non-globular regions from predicted protein structures.☆16Updated 2 years ago
- ☆15Updated 9 months ago
- All-Atom (Including Hydrogen!) Ligand-Conditioned Protein Sequence Design & Sidechain Packing Model☆25Updated 3 weeks ago
- DyNoPy☆11Updated last year
- Protein design and sculpting using Rosetta and Deep learning methods (RFDiff and Alphafold2)☆44Updated 4 months ago
- Metrics to evaluate distributional coverage of generative models of protein structures.☆18Updated 4 months ago
- Disordered protein ensemble prediction☆11Updated 2 weeks ago
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆59Updated 7 months ago
- Benchmarking code accompanying the release of `bioemu`☆52Updated last month
- Boltzmann-ranked alternative protein conformations from reduced-MSA AlphaFold2☆60Updated last month
- Generative diverse protein backbones by protein language model☆34Updated 2 months ago
- ☆37Updated 2 years ago