ComputationalBiologyLab-IIITH / HYDRALinks
☆10Updated last year
Alternatives and similar repositories for HYDRA
Users that are interested in HYDRA are comparing it to the libraries listed below
Sorting:
- Guiding diffusion models for antibody sequence and structure co-design with developability properties.☆33Updated 9 months ago
- ☆23Updated 3 months ago
- scripts to find PBD structures for cancer driver proteins☆31Updated 6 months ago
- PackDock: a Diffusion Based Side Chain Packing Model for Flexible Protein-Ligand Docking☆34Updated 10 months ago
- Utility for building inverse rotamer assemblies out of a Rosetta matcher/enzdes constraint file.☆23Updated 5 months ago
- ☆14Updated 5 months ago
- ☆13Updated 6 months ago
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆32Updated 2 years ago
- Protein Sequence Evolutionary Information Language Model☆13Updated last year
- ☆14Updated 2 months ago
- ☆28Updated 8 months ago
- Deep generative modeling of protein structural ensembles☆25Updated 5 months ago
- ☆37Updated 2 weeks ago
- A conditionally adapted protein language model for the generation of enzymes☆22Updated 9 months ago
- Updated Protpardelle models with more robust motif scaffolding and multichain support☆28Updated this week
- Modelling protein conformational landscape with Alphafold☆51Updated last month
- Boltzmann-ranked alternative protein conformations from reduced-MSA AlphaFold2☆57Updated 3 weeks ago
- Antibody Langauge Ensemble Fusion - fuses antibody structural ensemble and language representation for property prediction☆12Updated last year
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆51Updated 3 months ago
- Binding pocket optimization based on force fields and docking scoring functions☆34Updated 5 months ago
- Official implementation of NeurIPS'24 paper "Bridge-IF: Learning Inverse Protein Folding with Markov Bridges"☆16Updated 5 months ago
- IDPFold test version☆21Updated 11 months ago
- ☆38Updated 11 months ago
- ProteinDesign with RFdiffusion and ProteinMPNN/LigandMPNN☆19Updated 5 months ago
- SE(3) diffusion models for generating CDR loops☆10Updated last year
- bakerlab pymol scripts☆24Updated 5 years ago
- Generative diverse protein backbones by protein language model☆33Updated 8 months ago
- Knowledge-Guided Diffusion Model for 3D Ligand-Pharmacophore Mapping☆38Updated 2 months ago
- A benchmark for 3D biomolecular structure prediction models☆64Updated 3 months ago
- This repository contains the AlphaCutter.py for the removal of non-globular regions from predicted protein structures.☆15Updated 2 years ago