An open, collaborative project to analyze data from the Single-cell Pediatric Cancer Atlas (ScPCA) Portal
☆16Jul 17, 2026Updated this week
Alternatives and similar repositories for OpenScPCA-analysis
Users that are interested in OpenScPCA-analysis are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Single Cell RNA PolyA Site Discovery☆11Updated this week
- Pipeline for the identification of cancer-related mutations from RNA-seq data☆14Aug 17, 2021Updated 4 years ago
- Single-cell analysis with non-negative matrix factorization☆49Jul 24, 2025Updated 11 months ago
- ☆16Apr 18, 2025Updated last year
- mitochondrial variant analysis tools☆15Mar 4, 2021Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- The Open Pediatric Cancer Project, maintained at Children's National☆15Jun 29, 2026Updated 3 weeks ago
- An automated ChIP-seq pipeline using Nextfow☆18Oct 6, 2022Updated 3 years ago
- ☆10Jul 10, 2024Updated 2 years ago
- The manuscript repository for the Open Pediatric Brain Tumor Atlas Project☆14Jun 21, 2023Updated 3 years ago
- All documentation associated with bioinformatics tutorial on the Alpine cluster☆33Jun 15, 2026Updated last month
- Library for indexing VCF files for random access searches by rsID☆17Mar 2, 2026Updated 4 months ago
- A simple example of parsing BAM files using htslib☆12Mar 22, 2016Updated 10 years ago
- ☆12Aug 20, 2024Updated last year
- A CLI app that provides functionality around the LifeOmic platform.☆21Jul 5, 2026Updated 2 weeks ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Implements *CellAnnotator (aka *CAT/starCAT), annotating scRNA-Seq with predefined gene expression programs☆107Jul 13, 2026Updated last week
- scRNA数据分析中文教程☆11Jul 29, 2019Updated 6 years ago
- Critic markup filter for quarto☆35Sep 8, 2025Updated 10 months ago
- Fast and scalable inference for single-cell differential gene expression of multiple patients☆15Jul 3, 2026Updated 2 weeks ago
- ☆12May 12, 2023Updated 3 years ago
- From geospatial to spatial -omics☆103Updated this week
- Sanger Cellular Genetics single-cell ATAC-seq pipeline.☆13Aug 25, 2023Updated 2 years ago
- ☆24Jul 8, 2026Updated last week
- This project contains the webapp sample integrated with AWS HealthOmics, which allows users such as admin and bioinformaticians to operat…☆19Nov 20, 2024Updated last year
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆25Jun 25, 2026Updated 3 weeks ago
- ☆21Jul 16, 2024Updated 2 years ago
- Pipeline for Analysis of ChIP-Seq data☆10May 20, 2026Updated 2 months ago
- Example of run CytoSig and reproduce prediction results on bulk and single-cell cohorts☆16Jul 5, 2023Updated 3 years ago
- R code in workflow of chip-seq analysis☆11Nov 20, 2019Updated 6 years ago
- Calculate and plot distributions of genomic ranges☆27Apr 23, 2025Updated last year
- Alternative splicing resource☆58Mar 31, 2018Updated 8 years ago
- ☆10Apr 30, 2019Updated 7 years ago
- Preprocessing tools for unique molecular index (UMI) sequencing reads☆31Apr 25, 2023Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Manager for multi-container computing environments☆26Mar 6, 2026Updated 4 months ago
- R/shiny interface for interactive visualization of data in SummarizedExperiment objects☆230Jul 13, 2026Updated last week
- mosaicMPI: mosaic multi-resolution program integration☆12Jul 9, 2026Updated last week
- PCA for hidden variable inference in QTL mapping: an R package and tutorial☆24Jan 25, 2023Updated 3 years ago
- Framework for building R interfaces to shell commands☆17Oct 12, 2020Updated 5 years ago
- ☆13Apr 24, 2023Updated 3 years ago
- Enhanced Chromatin Occupancy (EChO)☆13Jan 8, 2020Updated 6 years ago