DFAST Quality Control: Taxonomy and completeness check
☆18May 7, 2025Updated 10 months ago
Alternatives and similar repositories for dfast_qc
Users that are interested in dfast_qc are comparing it to the libraries listed below
Sorting:
- ☆20Sep 4, 2024Updated last year
- ☆15May 1, 2025Updated 10 months ago
- Intelligent and cost-effective bidding on cloud computing instances for bioinformatics pipelines.☆13Dec 8, 2017Updated 8 years ago
- Rust coder/decoder for Nucleotide Archival Format (NAF) files.☆10Jan 31, 2025Updated last year
- Find Unique genomic Regions☆32Feb 25, 2026Updated last week
- Development repo for pyani-plus (the next iteration of pyani)☆25Feb 25, 2026Updated last week
- ☆13Feb 24, 2026Updated last week
- High throughput tool for tall and wide multiple sequence alignment.☆26Feb 10, 2026Updated 3 weeks ago
- Robust individual and aggregate checksums for nucleotide sequences☆17Updated this week
- Predict oxygen, temperature, salinity, and pH preferences of bacteria and archaea from a genome☆67Mar 28, 2025Updated 11 months ago
- ☆16Jun 2, 2024Updated last year
- ☆15Apr 2, 2024Updated last year
- Origin of Chromosomal Replication Assessment. Python tool for the analysis of circular bacterial DNA sequences in order to find their ori…☆18Oct 10, 2025Updated 4 months ago
- Splitting and accelerating the Oxford Nanopore basecaller guppy using CPU with the SLURM job scheduler☆16Jul 1, 2024Updated last year
- ☆18Nov 7, 2025Updated 4 months ago
- Unleash the full power of your k-mers!☆24Jan 13, 2026Updated last month
- Non-redundant pangenome assemblies from multiple genomes or bins☆15May 13, 2025Updated 9 months ago
- 🦠🧬🧑💻📇 Microbial genomes-to-report pipeline☆73Feb 25, 2026Updated last week
- Leviathan: A fast, memory-efficient, and scalable taxonomic and pathway profiler for (pan)genome-resolved metagenomics and metatranscript…☆18Feb 4, 2026Updated last month
- ☆19Nov 17, 2025Updated 3 months ago
- A smorgasbord of R functions for performing and teaching population genomic analyses☆19Jan 26, 2026Updated last month
- Orpheum (Previously called and published under sencha) is a Python package for directly translating RNA-seq reads into coding protein seq…☆19Oct 4, 2022Updated 3 years ago
- VCF Observer is a VCF file analysis, comparison, and visualization tool.☆18Jan 3, 2025Updated last year
- Generation and updating of protein families☆23Feb 27, 2026Updated last week
- KAUST Assembly Read Error Correction Tool☆15Aug 15, 2015Updated 10 years ago
- Sequence-independent identification and removal of adapters/systemic contamination in shotgun sequencing data. https://doi.org/10.1093/bi…☆18Apr 4, 2023Updated 2 years ago
- BlockPolish: accurate polishing of long-read assembly via block divide-and-conquer☆17Jun 15, 2023Updated 2 years ago
- A simple script to display stuff on a world map with R and ggplot☆17Feb 17, 2026Updated 2 weeks ago
- Index kmtricks bf matrices☆46Feb 13, 2026Updated 3 weeks ago
- All of my various bioinformatic scripts fit for public consumption (loosely defining "fit")☆82Mar 2, 2023Updated 3 years ago
- Centromics: visualing centromeres with multiple omics data☆21Jan 18, 2024Updated 2 years ago
- Metagenomic binning using low-density hashing a support vector machine☆20Oct 2, 2020Updated 5 years ago
- Docker images of bioinformatics software☆21Jun 15, 2017Updated 8 years ago
- Amalgamated likelihood estimation (ALE) is a probabilistic approach to exhaustively explore all reconciled gene trees that can be amalgam…☆53May 14, 2025Updated 9 months ago
- Phyling: phylogenetic inference from annotated genomes☆31Updated this week
- ☆11Jul 3, 2022Updated 3 years ago
- software to identify primers that can distinguish genomes☆20Jan 23, 2026Updated last month
- k-mers and the like☆22Updated this week
- ☆19Jan 16, 2024Updated 2 years ago