shenorrLabTRDF / TimeAxLinks
Multiple trajectory alignment of time-series data
☆13Updated last year
Alternatives and similar repositories for TimeAx
Users that are interested in TimeAx are comparing it to the libraries listed below
Sorting:
- Analysis of imbalanced data and its impacts in a scRNA-seq integration setting☆30Updated 6 months ago
- ☆21Updated last year
- Materials and scripts for building cell type encyclopedia table☆20Updated 8 months ago
- Tutorials for multimodal omics data analysis☆17Updated 6 months ago
- cTPnet Package☆25Updated 3 years ago
- ☆13Updated 2 weeks ago
- ☆19Updated 5 months ago
- ☆57Updated last year
- ACTIONet single-cell analysis framework☆42Updated last year
- cell type deconvolution for multi-condition bulk RNA-seq data☆27Updated 3 years ago
- Gene group activity utility functions for Scanpy☆88Updated 9 months ago
- Gene regulatory network containing signed transcription factor-target gene interactions☆87Updated 3 months ago
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆43Updated 2 weeks ago
- ☆44Updated 3 years ago
- Reproducibility notebooks for scPoli☆19Updated 2 years ago
- Unified access to several second-generation deconvolution methods☆76Updated 2 weeks ago
- Beyondcell is a computational methodology for identifying tumour cell subpopulations with distinct drug responses in single-cell RNA-seq …☆53Updated last year
- Using BCR and expression for sequence embedding☆25Updated this week
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated 10 months ago
- Hotspot cluster distance analysis in spatial transcriptomic data☆29Updated 7 months ago
- tumor - cancer cell line alignment. Use it on the depmap portal or install it with pip.☆11Updated last year
- A toolkit for optimal workflow recommendation for proteomics data differential expression analysis☆17Updated 11 months ago
- Multimodal weakly supervised learning to identify disease-specific changes in single-cell atlases☆34Updated last month
- ☆16Updated last year
- ☆26Updated 3 months ago
- A modular tool for proportion analysis in single-cell sequencing data☆23Updated this week
- Collection of scripts for analysis of pan fetal immune atlas☆28Updated 3 years ago
- scMEGA: Single-cell Multiomic Enhancer-based Gene regulAtory network inference☆40Updated last year
- A unified interface to spatial transcriptomics deconvolution tools☆42Updated this week
- MOJITOO: a fast and universal method for integration of multimodal single cell data☆11Updated 10 months ago