shenorrLabTRDF / TimeAxLinks
Multiple trajectory alignment of time-series data
☆13Updated 2 years ago
Alternatives and similar repositories for TimeAx
Users that are interested in TimeAx are comparing it to the libraries listed below
Sorting:
- Analysis of imbalanced data and its impacts in a scRNA-seq integration setting☆31Updated 9 months ago
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆44Updated 3 months ago
- ☆21Updated last year
- ☆23Updated 2 months ago
- ACTIONet single-cell analysis framework☆44Updated last year
- cell type deconvolution for multi-condition bulk RNA-seq data☆30Updated 3 years ago
- ☆15Updated 2 years ago
- ☆10Updated last week
- Example of run CytoSig and reproduce prediction results on bulk and single-cell cohorts☆14Updated 2 years ago
- A toolkit for optimal workflow recommendation for proteomics data differential expression analysis☆19Updated last year
- Reproducibility notebooks for scPoli☆21Updated 2 years ago
- Materials and scripts for building cell type encyclopedia table☆20Updated 3 weeks ago
- Hotspot cluster distance analysis in spatial transcriptomic data☆33Updated 10 months ago
- cTPnet Package☆27Updated 3 years ago
- ☆13Updated 3 months ago
- Supporting data files and code for the publication by Shilts et al.☆31Updated 3 years ago
- ☆17Updated last year
- ☆26Updated 7 months ago
- ☆13Updated last year
- Spatially-resolved Transcriptomics via Epitope Anchoring☆19Updated last year
- ☆17Updated last year
- ☆57Updated last year
- ☆62Updated 2 years ago
- A modular tool for proportion analysis in single-cell sequencing data☆24Updated 3 months ago
- Python Toolkit for Transcription Factor Activity Inference and Clustering of scRNA-seq Data☆26Updated 2 weeks ago
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated last year
- Beyondcell is a computational methodology for identifying tumour cell subpopulations with distinct drug responses in single-cell RNA-seq …☆56Updated last year
- ☆53Updated 2 years ago
- UNAGI: deep generative AI for virtual disease and unsuperivsed in-silico perturbations.☆46Updated last week
- Gene group activity utility functions for Scanpy☆99Updated last year