Alternatives and similar repositories for scrna_seq_workshop_2020

Users that are interested in scrna_seq_workshop_2020 are comparing it to the libraries listed below

• Papatheodorou-Group / CATD_snakemake
  Snakemake pipeline for benchmarking cell-type deconvolution methods and deconvolving real bulk RNA-seq data with the use of scRNA-seq dat…
  ☆15Updated 6 months ago
• waldronlab / MultiAssayWorkshop
  Multi-omic Integration and Analysis of cBioPortal and TCGA data with MultiAssayExperiment
  ☆24Updated 4 months ago
• crazyhottommy / scRNA-seq-workshop-Fall-2019
  Harvard FAS informatics scRNAseq workshop website
  ☆38Updated 6 years ago
• Core-Bioinformatics / bulkAnalyseR
  ☆29Updated 2 years ago
• crazyhottommy / scCustomize
  Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.
  ☆16Updated 3 years ago
• montilab / BS831
  Course Materials for Genomics Data Mining
  ☆22Updated 2 months ago
• sigven / oncoEnrichR
  Explore the cancer relevance of your gene list
  ☆52Updated 2 months ago
• bigbioinformatics / single_cell_rna_seq_workshop
  repository for the single cell RNA-Seq workshop
  ☆31Updated 4 years ago
• wwylab / DeMixT
  ☆36Updated last month
• TheJacksonLaboratory / BRCA-LRseq-pipeline
  Pipeline to analyze long-read mRNA isoforms and ORF products sequenced in breast cancer using PacBio Single-Molecule technology.
  ☆16Updated 3 years ago
• ajitjohnson / imsig
  Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours
  ☆27Updated 4 years ago
• mbourgey / EBI_cancer_workshop_CNV
  hands-on for NGS/SNParray CNV call trainning
  ☆20Updated 3 years ago
• jgamache014 / snRNA-seq-workflow
  Human brain, >200,000 nuclei
  ☆24Updated 4 years ago
• lagelab / quack
  Machine learning algorithm to predict biological pathway relationships based on functional genomics networks
  ☆20Updated 7 years ago
• ConesaLab / MultiPower
  Statistical power studies for multi-omics experiments.
  ☆32Updated 10 months ago
• NKI-GCF / XenofilteR
  Filtering of PDX samples for mouse derived reads
  ☆28Updated 2 years ago
• NBISweden / workshop-epigenomics-RTDs
  workshop website on readthedocs
  ☆21Updated last month
• icbi-lab / Immunophenogram
  ☆41Updated 7 years ago
• ShixiangWang / Variants2Neoantigen
  A neoantigen calling pipeline begins from variants record file (MAF) (Not maintain now)
  ☆29Updated 6 years ago
• MD-Anderson-Bioinformatics / BatchEffectsPackage
  The MBatch R package and Docker image are designed to help assess and correct for batch effects.
  ☆16Updated last year
• kevinblighe / scDataviz
  scDataviz: single cell dataviz and downstream analyses
  ☆64Updated 4 years ago
• dzhang32 / dasper
  Detecting Aberrant Splicing Events from RNA-sequencing data
  ☆16Updated 11 months ago
• Aufiero / circRNAprofiler
  ☆11Updated 6 months ago
• Xiang-HF-Zhang / Dichotomous-of-innate-immune-landscape
  Dichotomous of innate immune landscape
  ☆17Updated 6 years ago
• gevaertlab / MethylMix
  Identification of differentially methylated genes in biomedical data
  ☆15Updated 6 years ago
• XSLiuLab / tumor-immunogenicity-score
  TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020
  ☆33Updated 4 years ago
• wkl1990 / Illumina450K-methylation
  From IDAT to beta.
  ☆25Updated 7 years ago
• NBISweden / workshop-RNAseq
  Workshop • Analysis of RNA-seq data
  ☆37Updated last year
• crazyhottommy / single-cell-DNAseq-notes
  ☆16Updated 3 years ago
• MD-Anderson-Bioinformatics / MBatch
  Superseded by https://github.com/MD-Anderson-Bioinformatics/BatchEffectsPackage
  ☆12Updated 5 years ago