Gene network analysis
☆20Dec 2, 2022Updated 3 years ago
Alternatives and similar repositories for EGAD
Users that are interested in EGAD are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Construction of small-world, scale-free networks☆16Mar 16, 2017Updated 9 years ago
- PhosR is a package for the comprehensive analysis of phosphoproteomic data.☆20Sep 4, 2025Updated 9 months ago
- A Comprehensive R Package For Analyzing Quantitative Phosphoproteomics Data☆13Nov 30, 2022Updated 3 years ago
- Nextflow pipeline wrapper for executing Cell Ranger☆13Mar 8, 2022Updated 4 years ago
- Code and data used to create the JASPAR UCSC Genome Browser tracks data hub☆18Dec 11, 2025Updated 6 months ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- ☆19Jul 8, 2021Updated 4 years ago
- Using the function read.table() to break file into chunks to loop and process them. This allows processing files of any size beyond what …☆10Aug 19, 2014Updated 11 years ago
- Given a reference, PhaME extracts SNPs from complete genomes, draft genomes and/or reads. Uses SNP multiple sequence alignment to constr…☆33Nov 28, 2023Updated 2 years ago
- Fast and lightweight R6 parameter interface☆12Aug 28, 2022Updated 3 years ago
- Method for performing genome-wide association like studies on neighborhoods identified on biological networks relevant for the phenotype …☆17Jun 28, 2023Updated 2 years ago
- Discovery of biological sequence motifs in R☆28Dec 20, 2018Updated 7 years ago
- Tidy methods for Bayesian treatment effect models☆18Dec 8, 2025Updated 6 months ago
- common useful script☆34Updated this week
- MAGIC - imputation and de-noising single-cell RNA seq data sets☆27Sep 19, 2019Updated 6 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Auto-annotations from Mouse brain development☆12Jul 11, 2020Updated 5 years ago
- Explanations for survival models☆15Sep 7, 2022Updated 3 years ago
- 16S rRNA Sequencing Data from the Human Microbiome Project☆10May 14, 2026Updated 3 weeks ago
- Predicting the impact of mutations on kinase–substrate phosphorylation☆10Apr 12, 2023Updated 3 years ago
- Somatic point mutation caller☆17Jul 8, 2016Updated 9 years ago
- Step-wise assembly of the neonatal virome modulated by breast feeding.☆11Aug 20, 2021Updated 4 years ago
- Statistical comparison of two networks with respect to three invariance measures☆26Sep 4, 2023Updated 2 years ago
- Subset of Galaxy (http://galaxyproject.org/) core code designed to be used as a library.☆12Jul 22, 2020Updated 5 years ago
- Highly scalable integration and classification of single-cell RNA sequencing data☆11Dec 27, 2020Updated 5 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Integrated platform for unifying scientific workflow management and graph databases for transcriptome data analysis.☆10Oct 19, 2018Updated 7 years ago
- SOAP-HLA is a flow of sequencing data analysis pipeline to type all of the HLA genes in IMGT/HLA database using capture sequenced data or…☆10Jun 3, 2020Updated 6 years ago
- R for Mass Spectrometry documentation☆15May 22, 2026Updated 3 weeks ago
- 「生物ネットワーク解析」の補足資料☆26Feb 20, 2025Updated last year
- Category-wide association study (CWAS) (Werling et al., 2018; An et al., 2018)☆10Apr 5, 2026Updated 2 months ago
- Tutorial on Reproducible Research in R with rrtools☆17Nov 30, 2019Updated 6 years ago
- cancereffectsizeR: An R package for calculation of somatic mutation rates and quantification of selection in cancer☆20Jan 6, 2026Updated 5 months ago
- Tutorials and examples for nicer animations (movies) and images in PyMOL.☆21Jan 29, 2015Updated 11 years ago
- Interactive TooManyCells Trees☆14Dec 6, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- FIREcaller: an R package for detecting frequently interacting re-gions from Hi-C data☆14Nov 4, 2022Updated 3 years ago
- ☆10Jan 19, 2019Updated 7 years ago
- Total copy number inference from single-cell RNA and ATAC sequing with cell clustering☆12Oct 31, 2024Updated last year
- R package: translate R to English☆19May 7, 2024Updated 2 years ago
- ☆10Sep 27, 2022Updated 3 years ago
- ☆15Aug 2, 2022Updated 3 years ago
- Network Visualization using both GUI and Programming☆29May 27, 2025Updated last year