sarbal / EGADLinks
Gene network analysis
☆19Updated 2 years ago
Alternatives and similar repositories for EGAD
Users that are interested in EGAD are comparing it to the libraries listed below
Sorting:
- Examples of kallisto + sleuth☆11Updated 8 years ago
- Query sequence data (VCF/BCF1/BCF2, Tabix, BGEN, PLINK) in R☆30Updated 8 months ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆29Updated 10 months ago
- Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects☆44Updated last month
- Workflow for ZINB-WaVE + DESeq2 intergration for single-cell RNA-seq☆31Updated 4 years ago
- Create a cromphensive report of DEG list coming from any analysis of RNAseq data☆26Updated last year
- Modeling and correcting fragment sequence bias for RNA-seq☆24Updated last year
- GWAS gold standards repository☆34Updated last year
- Code and data resources accompanying Urbut et al (2017), "Flexible statistical methods for estimating and testing effects in genomic stud…☆24Updated 2 years ago
- Machine learning use cases for teaching☆13Updated 7 years ago
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆16Updated 6 years ago
- R package for Enrichment Depletion Logos (EDLogos) and String Logos☆27Updated 6 years ago
- GEO RNA-seq Experiments Processing Pipeline☆21Updated 5 years ago
- R package enabling statistical association analysis and using immunogenetic data transformation functions for HLA amino acid fine mapping…☆12Updated last year
- Benchmarks for RNA-seq quantification pipelines☆8Updated 5 years ago
- The KEGGgraph package to parse KEGG pathways in R into graph objects☆14Updated 2 months ago
- home of the bear's lair☆10Updated 8 years ago
- TOP results by CONfident efFECT Sizes.☆14Updated 6 months ago
- Repository for signature genes from Immune Cell Atlas☆18Updated 5 years ago
- ☆19Updated 7 years ago
- Gene-level general linear mixed model☆21Updated 5 months ago
- Code for EpiMap data browser☆14Updated last year
- Tutorial for the analysis of scRNA-seq data in R☆18Updated 6 years ago
- Toolkit for QTL mapping and meta-analysis.☆17Updated 3 years ago
- Repository for supplemental material of manuscripts☆18Updated 3 years ago
- zero-inflated negative binomial gene expression in R☆20Updated 7 years ago
- Template for building a bioconductor workshop package using github actions☆20Updated 11 months ago
- An R package for multi-dimensional pathway enrichment analysis☆16Updated 2 months ago
- R Interface to the NCBI SRA metadata☆23Updated 6 years ago
- stageR package☆13Updated 2 years ago