5c077 / ExpressionDBLinks
Application for hosting gene expression and ontology data with Shiny
☆17Updated 8 years ago
Alternatives and similar repositories for ExpressionDB
Users that are interested in ExpressionDB are comparing it to the libraries listed below
Sorting:
- A Practical (And Opinionated) Guide To Analyzing 450K Data☆35Updated 11 years ago
- NExt generation Analysis Toolbox☆14Updated 10 years ago
- Intro to workflows for efficient automated data analysis, using snakemake.☆32Updated 6 years ago
- Nozzle is a report generation toolkit for data analysis pipelines implemented in R.☆67Updated 9 years ago
- R Interface to the NCBI SRA metadata☆23Updated 7 years ago
- Bioconductor package that makes BIG data pint-sized.☆21Updated last year
- R package for extracting mutation signatures from a list of somatic mutations☆37Updated 6 years ago
- GeneSCF moved to a dedicated GitHub page, https://github.com/genescf/GeneSCF☆20Updated 5 years ago
- Tools for visualizing genomics data☆69Updated 4 years ago
- RNA-seq data comprehensive data analysis toolbox☆21Updated 3 years ago
- Lollipop-diagram to interactively visualize genetic mutations☆33Updated last year
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 3 years ago
- RNA-seq quantifications: gene expression responses to human rhinovirus infection for 6 asthmatic and 6 non-asthmatic donors (SRP046226)☆19Updated 8 years ago
- Modeling and correcting fragment sequence bias for RNA-seq☆24Updated last year
- Query sequence data (VCF/BCF1/BCF2, Tabix, BGEN, PLINK) in R☆32Updated 3 months ago
- DEAPP shiny App☆30Updated 3 years ago
- Analysis examples based on the ISB-CGC hosted TCGA data, using R and R Markdown.☆31Updated 8 years ago
- gnomAD browser pre-ASHG 2018☆33Updated 5 years ago
- Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects☆44Updated 2 months ago
- TOP results by CONfident efFECT Sizes.☆15Updated last year
- Seven Bridges API Client, CWL Schema, Meta Schema, and SDK Helper in R☆36Updated 3 years ago
- R package for Enrichment Depletion Logos (EDLogos) and String Logos☆27Updated 7 years ago
- Genomic plot in trellis layout☆42Updated last year
- Comprehensive Human Expressed SequenceS☆18Updated 6 months ago
- RNA-seq Viewer Team at the NCBI-assisted Boston Genomics Hackathon☆37Updated 8 years ago
- a Shiny/R application to view and annotate copy number variations☆28Updated 2 years ago
- AnaLysis routines for ePigenomicS data - 🏫 Bioconductor project☆16Updated 2 years ago
- BigWig manpulation tools using libBigWig and htslib☆30Updated last year
- Machine learning use cases for teaching☆13Updated 8 years ago
- SEQprocess: a modularized and customizable pipeline framework for NGS processing in R package☆17Updated 5 years ago