LDBlockShow: a fast and convenient tool for visualizing linkage disequilibrium and haplotype blocks based on VCF files
☆36Jul 5, 2025Updated 11 months ago
Alternatives and similar repositories for LDBlockShow
Users that are interested in LDBlockShow are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- PopLDdecay: a fast and effective tool for linkage disequilibrium decay analysis based on variant call format(VCF) files☆30Aug 15, 2024Updated last year
- VCF2Dis: an ultra-fast and efficient tool to calculate pairwise genetic distance and construct population phylogeny from VCF files☆57Jun 20, 2026Updated last week
- A Toolkit for analyzing next-generation DNA Re-Sequencing data☆15Feb 15, 2022Updated 4 years ago
- LDBlockShow: a fast and convenient tool for visualizing linkage disequilibrium and haplotype blocks based on VCF files☆219Jul 5, 2025Updated 11 months ago
- Bioinformatics tools for dealing with Multiple Alignment Format (MAF) files.☆11Jul 8, 2025Updated 11 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Multi-level visualization of genomic statistical variables on rectangular chromosomes☆46May 23, 2026Updated last month
- A new simple and efficient software to PCA and Cluster For popolation VCF File☆83Jun 25, 2025Updated last year
- BamDeal: a comprehensive toolkit for bam manipulation☆15Dec 21, 2022Updated 3 years ago
- An ultra-fast and efficient tool for high frequency kmer sequencing reads extraction☆19Mar 6, 2024Updated 2 years ago
- RRSelection: A linkage disequilibrium method to detect selection region across population VCF☆14Feb 11, 2019Updated 7 years ago
- An ultra-fast gzip file tools☆27Jun 23, 2026Updated last week
- Genome Assembly 102☆18Apr 23, 2025Updated last year
- FxTools: a comprehensive toolkit for FASTA and FASTQ file manipulation☆31Feb 16, 2022Updated 4 years ago
- Repository☆10Oct 23, 2024Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- A tool to use stereo-seq GEM and ssDNA to generate single-cell and 3D spatial resolved transtriptomics data☆14Oct 12, 2023Updated 2 years ago
- Plot allele frequencies in VCF files☆11Apr 13, 2026Updated 2 months ago
- The pipelines were built in the project resolving the genome of a diploid potato. Most of the scripts were sepcially designed to perform …☆24Jul 4, 2023Updated 2 years ago
- Example for TWAS☆12Jan 23, 2022Updated 4 years ago
- CGM 主站☆11Jun 8, 2026Updated 3 weeks ago
- ☆27May 8, 2022Updated 4 years ago
- ☆11Sep 4, 2024Updated last year
- The Vertebrate Genomes Project Mitogenome Assembly Pipeline☆19Mar 26, 2023Updated 3 years ago
- Handy scripts for routine bioinformatic analysis☆21May 5, 2025Updated last year
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Combine structural variation outputs from long sequencing reads into a superior call set☆18Aug 6, 2025Updated 10 months ago
- An R package for plotting GWAS results from the GAPIT package☆14Jun 20, 2026Updated last week
- Misassembly Identifier☆21Jun 2, 2026Updated 3 weeks ago
- The tools are used for displaying hic signal of genome☆26Jan 4, 2021Updated 5 years ago
- PopLDdecay: a fast and effective tool for linkage disequilibrium decay analysis based on variant call format(VCF) files☆208Aug 15, 2024Updated last year
- Any Way to Show Multi genomic Synteny☆230Jul 4, 2025Updated 11 months ago
- An ultra-fast and efficient genomic tool for coverage calculation☆171Jun 9, 2026Updated 3 weeks ago
- Ascertained Sequentially Markovian Coalescent☆18Oct 22, 2025Updated 8 months ago
- ggplot2-based Manhattan plot☆12Oct 18, 2022Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- This software tool implements the OPERA (omics pleiotropic association) method to test for combinatorial pleiotropic associations of mole…☆36Sep 26, 2024Updated last year
- Characterization of Structural Variation in Chinese samples☆17Dec 22, 2021Updated 4 years ago
- Various scripts that I have created that are useful for genome annotation (repeats & proteins)☆17Feb 21, 2022Updated 4 years ago
- A pure R implementation of locuszoom for plotting genetic data at genomic loci accompanied by gene annotations.☆59Mar 27, 2026Updated 3 months ago
- Analysis pipelines for QTL discovery and GWAS signals interpretation☆12Sep 3, 2024Updated last year
- BamDeal: a comprehensive toolkit for bam manipulation☆55Dec 21, 2022Updated 3 years ago
- VCF2Dis: A new simple and efficient software to calculate p-distance matrix and construct population phylogeny based Variant Call Forma…☆106Jun 20, 2026Updated last week