LDBlockShow: a fast and convenient tool for visualizing linkage disequilibrium and haplotype blocks based on VCF files
☆39Jul 5, 2025Updated last year
Alternatives and similar repositories for LDBlockShow
Users that are interested in LDBlockShow are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- PopLDdecay: a fast and effective tool for linkage disequilibrium decay analysis based on variant call format(VCF) files☆30Jul 16, 2026Updated 3 months ago
- Multi-level visualization of genomic statistical variables on rectangular chromosomes☆46Updated this week
- VCF2Dis: an ultra-fast and efficient tool to calculate pairwise genetic distance and construct population phylogeny from VCF files☆61Jun 20, 2026Updated 4 months ago
- A Toolkit for analyzing next-generation DNA Re-Sequencing data☆15Feb 15, 2022Updated 4 years ago
- A new simple and efficient software to PCA and Cluster For popolation VCF File☆84Aug 1, 2026Updated 3 months ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- LDBlockShow: a fast and convenient tool for visualizing linkage disequilibrium and haplotype blocks based on VCF files☆231Jul 5, 2025Updated last year
- An ultra-fast and efficient tool for high frequency kmer sequencing reads extraction☆19Mar 6, 2024Updated 2 years ago
- Bioinformatics tools for dealing with Multiple Alignment Format (MAF) files.☆11Aug 11, 2026Updated 2 months ago
- An ultra-fast gzip file tools☆29Jun 23, 2026Updated 4 months ago
- Analysis pipelines for QTL discovery and GWAS signals interpretation☆13Sep 3, 2024Updated 2 years ago
- ☆12Jun 10, 2024Updated 2 years ago
- BamDeal: a comprehensive toolkit for bam manipulation☆15Dec 21, 2022Updated 3 years ago
- My R scripts, primarily R plotting scripts + some genomics software including 16S rRNA metataxnomics and RNAseq☆12Dec 19, 2022Updated 3 years ago
- RRSelection: A linkage disequilibrium method to detect selection region across population VCF☆14Feb 11, 2019Updated 7 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- T2Tools is a toolset contains several tools for T2T assembly, and it is under development.☆17Sep 17, 2025Updated last year
- FxTools: a comprehensive toolkit for FASTA and FASTQ file manipulation☆31Feb 16, 2022Updated 4 years ago
- CGM 主站☆11Jun 8, 2026Updated 4 months ago
- Repository☆10Oct 23, 2024Updated 2 years ago
- Repository for scripts used in barley pan-genome graph construction with Minigraph☆15Oct 15, 2025Updated last year
- A tool to use stereo-seq GEM and ssDNA to generate single-cell and 3D spatial resolved transtriptomics data☆14Oct 12, 2023Updated 3 years ago
- ☆11Jun 15, 2026Updated 4 months ago
- Any Way to Show Multi genomic Synteny☆232Oct 14, 2026Updated 2 weeks ago
- The pipelines were built in the project resolving the genome of a diploid potato. Most of the scripts were sepcially designed to perform …☆24Jul 4, 2023Updated 3 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Plot allele frequencies in VCF files☆11Apr 13, 2026Updated 6 months ago
- An ultra-fast and efficient genomic tool for coverage calculation☆174Jun 9, 2026Updated 4 months ago
- Example for TWAS☆12Jan 23, 2022Updated 4 years ago
- ☆16Jul 7, 2025Updated last year
- scripts used for processing and analyzing data in the article.☆13Oct 31, 2019Updated 7 years ago
- hot_scan is a free software to detect genomic regions unusually rich (hotspot) in a given pattern via scan statistics☆10Oct 17, 2013Updated 13 years ago
- Cool Bioinformatics Scripts☆12May 21, 2024Updated 2 years ago
- PopLDdecay: a fast and effective tool for linkage disequilibrium decay analysis based on variant call format(VCF) files☆211Jul 16, 2026Updated 3 months ago
- A collection of tools for Genome Assembly analysis☆24May 29, 2024Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Create Regional Association Plots☆14May 27, 2026Updated 5 months ago
- ☆27May 8, 2022Updated 4 years ago
- The Vertebrate Genomes Project Mitogenome Assembly Pipeline☆19Mar 26, 2023Updated 3 years ago
- Handy scripts for routine bioinformatic analysis☆21May 5, 2025Updated last year
- A pure R implementation of locuszoom for plotting genetic data at genomic loci accompanied by gene annotations.☆65Updated this week
- Phylogenomic species tree inference under gene duplication and loss☆13Sep 20, 2026Updated last month
- Python Scripts for Bioinformatics☆15Apr 24, 2024Updated 2 years ago