☆26Dec 18, 2024Updated last year
Alternatives and similar repositories for ReConPlot
Users that are interested in ReConPlot are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Somatic structural variant caller for long-read data☆91Jun 2, 2026Updated last week
- A long-read analysis toolbox for cancer and population genomics☆23Jul 1, 2025Updated 11 months ago
- Learn fundamentals of scientific computing for biochemistry using Jupyter notebooks in Python☆17Dec 2, 2025Updated 6 months ago
- An R package for extracting mutational signatures from vcf files☆11Feb 13, 2025Updated last year
- ☆16May 23, 2026Updated 3 weeks ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Viola is a flexible and powerful python package designed specifically for analysis of genomic structural variant (SV) signatures.☆28Jul 26, 2024Updated last year
- ProSolo, variant calling from single cell DNA-seq data, or: bulk backing vocals for single cell solos.☆21Sep 1, 2021Updated 4 years ago
- A tool for somatic structural variant calling using long reads☆172Jun 8, 2026Updated last week
- Classify output of AmpliconArchitect to detect types of focal amplifications present☆23Jun 9, 2026Updated last week
- CoRAL: Reconstruction of focal amplifications with long reads☆31May 21, 2026Updated 3 weeks ago
- somatic SV calling on matched tumor-normal co-assembly graphs☆22Aug 1, 2024Updated last year
- ☆14Mar 28, 2025Updated last year
- ☆29Mar 1, 2026Updated 3 months ago
- ☆11May 12, 2021Updated 5 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- ☆17Jan 15, 2025Updated last year
- HATCHet (Holistic Allele-specific Tumor Copy-number Heterogeneity) is an algorithm that infers allele and clone-specific CNAs and WGDs jo…☆72Mar 19, 2026Updated 2 months ago
- ☆15Aug 17, 2023Updated 2 years ago
- Kmer based genotyper for short reads.☆23Oct 19, 2021Updated 4 years ago
- Whole genome workflows☆13Nov 9, 2024Updated last year
- Clonal and subclonal Copy Number Alteration quality check integrating somatic mutation☆26Jan 28, 2026Updated 4 months ago
- Repository for RecallME-v.0.1 a variant calling pipelines benchmarker and optimizer☆13Dec 18, 2023Updated 2 years ago
- SV clustering☆31Jul 5, 2021Updated 4 years ago
- ☆11Feb 23, 2022Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Irons out wrinkles in noisy coverage data using robust PCA☆15May 14, 2025Updated last year
- ☆33Nov 6, 2022Updated 3 years ago
- Snakemake-based workflow for detecting structural variants in genomic data☆82Feb 14, 2025Updated last year
- Methylmap is a tool for visualization of modified nucleotide frequencies for large cohort sizes.☆23Jan 23, 2026Updated 4 months ago
- A repository for hosting Nextflow DSL2 module files containing tool-specific process definitions and their associated documentation for M…☆11Updated this week
- ☆79Jul 12, 2023Updated 2 years ago
- A pipeline that accurately simulates high quality publicly cancer genomes (VCFs, CNAs and SVs).☆36Updated this week
- Easy genomic regions for short-read variant calling☆46Sep 10, 2025Updated 9 months ago
- MethPhaser: methylation-based haplotype phasing of human genomes☆55Mar 5, 2025Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Align subreads to ccs reads☆14Jun 11, 2025Updated last year
- DNN-based small variant caller☆12May 2, 2022Updated 4 years ago
- ☆17Oct 3, 2023Updated 2 years ago
- ☆16Jan 10, 2022Updated 4 years ago
- ☆20Nov 17, 2025Updated 6 months ago
- Bidirectional WFA (Paper)☆49May 20, 2024Updated 2 years ago
- Third-generation fusion gene detection☆13Jul 25, 2023Updated 2 years ago