Cell marker identification and evaluation pipeline in single cell transcriptomes.
☆10Jan 9, 2025Updated last year
Alternatives and similar repositories for cellMarkerPipe
Users that are interested in cellMarkerPipe are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Supplementary information for "Population-level comparisons of gene regulatory networks modeled on high-throughput single-cell transcript…☆11Jan 15, 2024Updated 2 years ago
- This is the repository which contains the code that was used to generate the results and figures of the “Single-cell RNA-sequencing revea…☆13Jun 21, 2024Updated last year
- Identify cell type based on cell markers for single cell squencing☆11Jul 10, 2024Updated last year
- Comprehensive Single-Cell Annotation and Transcriptomic Analysis Toolkit☆14Mar 12, 2026Updated 2 weeks ago
- Visual Studio Code extension for CodeQuery☆14Jun 16, 2024Updated last year
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Deconvolution of spatial transcriptomics at single-cell resolution☆20Sep 19, 2024Updated last year
- Open source project for creating a website for a Hypothetical Dream University(HDU) for beginners.☆13Oct 24, 2023Updated 2 years ago
- [READ ONLY] Subtree split of the siyuan-packages-monorepo (see https://github.com/Zuoqiu-Yingyi/siyuan-packages-monorepo)☆21May 3, 2024Updated last year
- 基于JAVA的WEB服务器,实现了GET方法,提供基本的配置管理工具,实现了基本的用户认证、网页防篡改、日志、站点统计每日访问的IP数等功能。☆12Apr 30, 2020Updated 5 years ago
- Text Generation Using RNNs☆12Dec 15, 2018Updated 7 years ago
- 豆瓣TOP250电影爬取,数据可视化实现,网页搭建☆13Nov 17, 2021Updated 4 years ago
- Materials and scripts for building cell type encyclopedia table☆20Mar 16, 2026Updated last week
- The benchmarking of spatial transcriptomics deconvolution methods☆34Feb 24, 2023Updated 3 years ago
- Batch alignment of single-cell transcriptomics data using deep metric learning☆24Feb 5, 2024Updated 2 years ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Course "Machine learning" in Bioinformatics Institute☆16Apr 23, 2024Updated last year
- HCA data analysis☆19Mar 30, 2021Updated 4 years ago
- scAce: an adaptive embedding and clustering method for scRNA-seq data☆12Sep 8, 2023Updated 2 years ago
- Python script to fetch GitHub repos metadata.☆25Jan 5, 2017Updated 9 years ago
- This is repo for the materials of the BI2023 python course☆21May 4, 2024Updated last year
- 基于Hadoop、Spark、FLUME、HIVE等大数据组件搭建的一个分布式集群环境下的电影推荐及日志分析平台☆18Jan 6, 2023Updated 3 years ago
- LuluTest is a Python framework for creating automated browser tests.☆16Jun 18, 2024Updated last year
- ☆13Jan 24, 2024Updated 2 years ago
- Snakemake workflow to benchmark scRNA-seq data simulators☆14Aug 10, 2022Updated 3 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Stochastic simulation of next-generation sequencing data from neutrally evolving tumors☆10Nov 9, 2016Updated 9 years ago
- Porting of Protein Activity and Pathway Inference to single cell and Python.☆15Feb 10, 2026Updated last month
- Brief tutorial for using Snakemake to create and submit jobs on a HPC cluster.☆15Mar 22, 2022Updated 4 years ago
- ☆12Jun 11, 2023Updated 2 years ago
- Implementation of Phenotype prediction from single-cell RNA-seq data using attention-based neural networks (Bioinformatics 2024).☆13Jul 15, 2024Updated last year
- Cross-platform data for sequencing-based spatial transcriptomics benchmarking☆13Oct 26, 2023Updated 2 years ago
- ☆18Jul 22, 2025Updated 8 months ago
- 大数据收集,实时分析,离线分析经典案例☆21Apr 21, 2023Updated 2 years ago
- ☆47May 4, 2024Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- tugHall: a simulator of cancer cell evolution based on the hallmarks of cancer, linked to the mutational states of tumor-related genes. T…☆13Dec 11, 2023Updated 2 years ago
- A clustering algorithm that can perform internal validation inspired by forest fire dynamics and self-organized criticality☆18May 18, 2022Updated 3 years ago
- ☆11Jun 25, 2024Updated last year
- Backend Repository for Journal Policy Tracker☆16Feb 16, 2023Updated 3 years ago
- Tool for finding matches to degenerate sequence motifs in FASTA files.☆13Mar 11, 2024Updated 2 years ago
- A Guide to the Analysis of Spatial Transcriptomics☆12Jul 29, 2024Updated last year
- An R framework for choosing clustering parameters in scRNA-seq analysis pipelines☆36Jun 12, 2020Updated 5 years ago