PaulingLiu / metaICB
☆22Updated 2 years ago
Alternatives and similar repositories for metaICB:
Users that are interested in metaICB are comparing it to the libraries listed below
- ☆17Updated last year
- ☆37Updated 2 years ago
- ☆16Updated last year
- ☆17Updated last year
- HCC single cell analysis for Alvarez, Benhammou et al.☆16Updated 2 years ago
- ☆16Updated 4 years ago
- Data available at: https://www.dropbox.com/sh/jh4s57kgbb0rnxe/AABoMK466cGc1OKsOuFN10wca?dl=0 and https://nyulangone-my.sharepoint.com//g/…☆30Updated 2 years ago
- Robust identification of perturbed cell types in single-cell RNA-seq data☆31Updated 4 months ago
- Unsupervised Inference of Developmental Directions for Single Cells☆21Updated last year
- Hierarchical Cell Annotation☆20Updated 5 months ago
- Code used to run the data analysis in the hdWGCNA manuscript (Morabito et al 2022)☆16Updated last year
- ☆12Updated last year
- ☆20Updated last year
- A minimal gene set characterizes multiple classes of tumor-specific TIL among different cancer types☆11Updated last month
- ☆13Updated 7 years ago
- MultiK is a data-driven tool that objectively assesses the optimal number(s) of clusters based on the concept of consensus clustering via…☆22Updated last year
- Single-cell RNA-seq data-based inference of multilayer inter- and intra-cellular signaling networks☆26Updated 3 years ago
- ☆18Updated last year
- sEV-containing droplet identification in scRNA-seq data (SEVtras)☆25Updated 2 months ago
- Deconvolution of spatial transcriptomics at single-cell resolution☆17Updated 7 months ago
- Gene set enrichment analysis for single-cell RNAseq data☆27Updated 2 years ago
- NEPAL is to calculate neuroendocrine (NE) risk score from bulk and single-cell transcriptomics of both human and mouse prostate cancer (P…☆11Updated 11 months ago
- ☆28Updated last month
- Code used to process the data of the HBCA project☆27Updated last year
- An R package for drug response prediction and drug-gene association prediction.☆18Updated last year
- Spatial transcriptomics of heart tissue☆20Updated 2 years ago
- Calculating Tumor microenvironment score☆28Updated 2 years ago
- FitDevo: accurate inference of single-cell developmental potential using sample-specific gene weight☆16Updated last year
- Code for the manuscript "Single-cell analysis of human primary prostate cancer reveals the heterogeneity of tumor-associated epithelial c…☆21Updated 2 years ago
- The codes and files for the study of subsolid nodules (SSN).☆14Updated 4 years ago