Alternatives and similar repositories for metaICB

Users that are interested in metaICB are comparing it to the libraries listed below

• Xiaxy-XuLab / PanCAF
  ☆37Updated 2 years ago
• phillipnicol / scDist
  Robust identification of perturbed cell types in single-cell RNA-seq data
  ☆31Updated 7 months ago
• YuLab-SMU / tigeR
  🐯 tigeR: Tumor Immunotherapy Gene Expression Data Analysis R package
  ☆33Updated last month
• smorabit / hdWGCNA_paper
  Code used to run the data analysis in the hdWGCNA manuscript (Morabito et al 2022)
  ☆16Updated 2 years ago
• YangJAT / HCA
  Hierarchical Cell Annotation
  ☆20Updated 7 months ago
• ZxZhou4150 / Redeconve
  Deconvolution of spatial transcriptomics at single-cell resolution
  ☆18Updated 9 months ago
• guangchunhan / LUAD_Code
  ☆21Updated last year
• jumphone / Vector
  Unsupervised Inference of Developmental Directions for Single Cells
  ☆22Updated last year
• AndersonHu85 / ccRCC_multiomics
  ☆16Updated last year
• Famingzhao / NEPAL
  Calculate NEPC risk score from bulk transcriptome data or single-cell RNA-seq for prostate cancer
  ☆14Updated 7 months ago
• aet21 / SCENT
  Estimation of Single-Cell Potency with Single Cell Entropy
  ☆41Updated 2 years ago
• zgyaru / anti-PD1_ESCC
  ☆17Updated last year
• yanailab / PanCancer
  Data available at: https://www.dropbox.com/sh/jh4s57kgbb0rnxe/AABoMK466cGc1OKsOuFN10wca?dl=0 and https://nyulangone-my.sharepoint.com//g/…
  ☆31Updated 2 years ago
• navinlabcode / HumanBreastCellAtlas
  Repository for codes for the HBCA paper
  ☆36Updated 2 years ago
• MarioniLab / hbca
  Code used to process the data of the HBCA project
  ☆29Updated last year
• gabrielakinker / CCLE_heterogeneity
  ☆56Updated last year
• arc85 / singleseqgset
  Gene set enrichment analysis for single-cell RNAseq data
  ☆28Updated 2 years ago
• CICAMS-Liu-lab / ECGEA
  ☆16Updated 4 years ago
• ChanLab-UTSW / BreastCancer_Integrated
  ☆30Updated 4 months ago
• lifei176 / Single-cell-atlas-of-sex-differences-and-androgen-effects
  ☆17Updated last year
• Teichlab / SKM_ageing_atlas
  ☆12Updated last year
• bischofp / single_cell_lung_adenocarcinoma
  ☆32Updated 3 years ago
• LungCellAtlas / scRNAseq_pipelines
  Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas
  ☆37Updated 4 years ago
• Teichlab / Genes2Genes
  Aligning gene expression trajectories of single-cell reference and query systems
  ☆69Updated 9 months ago
• FloWuenne / scFunctions
  Functions for single cell data analysis
  ☆32Updated 4 years ago
• bio-Pixel / panVC
  ☆50Updated last year
• jlaffy / infercna
  Infer Copy Number Alterations and Clonality in (Single-Cell) RNA-Seq Data
  ☆41Updated last year
• KramannLab / visium_heart
  Spatial transcriptomics of heart tissue
  ☆22Updated 3 years ago
• jinworks / scAB
  scAB detects multiresolution cell states with clinical significance
  ☆17Updated 2 years ago
• ZJUFanLab / CellTalkDB
  A manually curated database of literature-supported ligand-receptor interactions in human and mouse
  ☆31Updated last year