Alternatives and similar repositories for awesome-bioinformatics-tools

Users that are interested in awesome-bioinformatics-tools are comparing it to the libraries listed below

• wrf / genomeGTFtools
  convert various features into a GFF-like file for use in genome browsers
  ☆72Updated last month
• DessimozLab / read2tree
  a tool for inferring species tree from sequencing reads
  ☆156Updated last month
• tao-bioinfo / PrimerServer2
  PrimerServer2: a high-throughput primer design and specificity-checking platform
  ☆80Updated 3 years ago
• UCSC-LoweLab / tRNAscan-SE
  A program for detection of tRNA genes
  ☆80Updated 3 years ago
• Tong-Chen / s-plot
  A simple plot library
  ☆52Updated 8 years ago
• slt666666 / NLRtracker
  NLR annotation tool
  ☆35Updated last year
• CompSynBioLab-KoreaUniv / FunGAP
  FunGAP: fungal Genome Annotation Pipeline
  ☆111Updated 7 months ago
• youngDouble / GO_KEGG_annotation
  GO KEGG annotation
  ☆39Updated 3 years ago
• Stephane-S / Simplot_PlusPlus
  ☆39Updated 2 years ago
• harvardinformatics / GenomeAnnotation
  Best practices and workflow for genome annotation
  ☆79Updated 8 months ago
• paulstothard / cgview
  CGView is a Java package for generating high-quality, zoomable maps of circular genomes.
  ☆50Updated last year
• hsinnan75 / GSAlign
  GSAlign: an ultra-fast sequence alignment algorithm for intra-species genome comparison
  ☆60Updated last year
• broadinstitute / catch
  A package for designing compact and comprehensive capture probe sets.
  ☆92Updated last year
• xuzhougeng / myscripts
  ☆61Updated last year
• Kuanhao-Chao / LiftOn
  🚀 LiftOn: Accurate annotation mapping for GFF/GTF across assemblies
  ☆118Updated last month
• zhaotao1987 / SynNet-Pipeline
  Workflow for Building Microsynteny Networks
  ☆58Updated 3 years ago
• DessimozLab / FastOMA
  FastOMA is a scalable software package to infer orthology relationship.
  ☆86Updated last week
• EBI-Metagenomics / genomes-catalogue-pipeline
  MGnify genome analysis pipeline
  ☆108Updated this week
• EVidenceModeler / EVidenceModeler
  source code for EVM
  ☆120Updated last year
• mritchielab / long_read_tools
  A catalogue of available long read sequencing data analysis tools
  ☆83Updated this week
• Juke34 / awesome-awesomeness-bioinformatics
  A list of awesome awesomeness related to bioinformatics and associated fields
  ☆42Updated 9 months ago
• takaram / kofam_scan
  CLI tool to annotate genes with KOfam
  ☆87Updated 2 years ago
• bhattlab / kraken2_classification
  Snakemake workflow for metagenomic classification with Kraken2
  ☆66Updated 2 years ago
• ogotoh / spaln
  Genome mapping and spliced alignment of cDNA or amino acid sequences
  ☆109Updated 7 months ago
• mjsull / Easyfig
  Development version of Easyfig
  ☆102Updated 2 years ago
• gao-lab / CPC2_standalone
  Official repo for the standalone package of Coding Potential Calculator (CPC) 2.
  ☆28Updated 4 years ago
• MikeAxtell / ShortStack
  ShortStack: Comprehensive annotation and quantification of small RNA genes
  ☆97Updated 2 months ago
• Sentieon / sentieon-scripts
  Helper scripts for biological data processing from Sentieon
  ☆64Updated 2 months ago
• shenwei356 / perfect-bioinformatic-tools
  What should perfect bioinformatic tools be like?
  ☆143Updated 2 months ago
• hzi-bifo / RiboDetector
  Accurate and rapid RiboRNA sequences Detector based on deep learning
  ☆116Updated last month