A curated list of awesome Bioinformatics databases, softwares, libraries, toolboxes, pipelines, books, courses, tutorials and more.
☆45Sep 2, 2021Updated 4 years ago
Alternatives and similar repositories for awesome-bioinformatics
Users that are interested in awesome-bioinformatics are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Awk, bash, python scripts for processing NGS data☆14Nov 6, 2015Updated 10 years ago
- Awesome resources on Bioinformatics, data science, machine learning, programming language (Python, Golang, R, Perl) and miscellaneous stu…☆757Apr 27, 2026Updated 3 weeks ago
- Bring Your Own Bioinformatics☆27Apr 28, 2016Updated 10 years ago
- A pan-cancer genome-wide analysis reveals tumour dependencies by induction of nonsense-mediated decay☆15Nov 2, 2020Updated 5 years ago
- Protein common interface databases☆10Apr 13, 2019Updated 7 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- What exactly are the non-canonical amino acids in the Rosetta database folder?☆12Feb 16, 2020Updated 6 years ago
- Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects☆44Updated this week
- Learn and practice the bioinformatics skills in 100 Days.☆83Sep 26, 2019Updated 6 years ago
- Implements the blood brain barrier score described in: J. Med. Chem. 2019, 62, 21, 9824-9836 (https://doi.org/10.1021/acs.jmedchem.9b0122…☆14Sep 27, 2020Updated 5 years ago
- Online Homework Management System☆31Mar 27, 2016Updated 10 years ago
- Mostly deprecated in favor of : https://github.com/hbc/bcbioRNASeq. Quality control, differential gene/transcript expression and pathway …☆26Dec 11, 2017Updated 8 years ago
- A curated list of awesome Bioinformatics libraries and software.☆4,042Apr 7, 2026Updated last month
- Tool comparison for detecting differentially expressed individual transposable elements☆11Jan 7, 2022Updated 4 years ago
- Validation of sycnmers compared to minimizers☆11May 10, 2025Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- wgs_pipeline☆18Dec 3, 2013Updated 12 years ago
- Public Benchmark of Long-Read Structural Variant Caller on ONT PromethION Data☆14Nov 28, 2019Updated 6 years ago
- A curated list of awesome Bioinformatics software, tools and resources☆32Mar 10, 2026Updated 2 months ago
- Structural Bioinformatics is awesome. Throw your textbook in the garbage, light the garbage can on fire, and blend the ashes into your co…☆79May 5, 2023Updated 3 years ago
- Code for biostar tutorials - mostly R and Perl☆50Jul 31, 2024Updated last year
- A python package to explore pathways, diseases and drugs associated to a list of targets (genes, proteins, etc)☆20Mar 4, 2026Updated 2 months ago
- ☆22Jul 2, 2020Updated 5 years ago
- Cantù Lab @ UC Davis - Annotation pipeline - EVM based☆15Nov 1, 2024Updated last year
- Curated list of TCGA resources☆61Nov 10, 2017Updated 8 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Arabidopsis RNA_-seq downstream analysis shiny app☆31Jul 22, 2019Updated 6 years ago
- Snakefiles for common RNA-seq data analysis workflows (STAR and Kallisto).☆94Jul 18, 2017Updated 8 years ago
- Proxy server for downloading academic papers☆12Sep 5, 2018Updated 7 years ago
- ☆12Sep 27, 2018Updated 7 years ago
- Calculate circos format data of GC content and GC skew from genome data.☆12Sep 20, 2025Updated 8 months ago
- By study this, it won't be costly or time-consuming to customize a NGS data analysis pipeline☆332Dec 21, 2018Updated 7 years ago
- Chromosome Scale Assembler: A high-throughput chromosome scale genome assembly pipeline for vertebrate genomes☆10Oct 16, 2024Updated last year
- Inferring multi-modality dynamics for single cell genomics data☆13Dec 18, 2025Updated 5 months ago
- A list of useful bioinformatics resources☆633May 4, 2026Updated 2 weeks ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Simple code snippets and data for the One Flowcell - One Assembly study☆34Jan 2, 2018Updated 8 years ago
- For anyone who are eager to applying deep learning in bioinformatics!☆123Oct 4, 2018Updated 7 years ago
- ☆20Sep 25, 2020Updated 5 years ago
- R for Mass Spectrometry documentation☆15May 5, 2026Updated 2 weeks ago
- SingleCell: A Python/Cython Package for Processing Single-Cell RNA-Seq Data.☆11Jan 26, 2018Updated 8 years ago
- SWORD - a highly efficient protein database search☆26Jan 15, 2024Updated 2 years ago
- Parses and Plots Illumina SAV files☆13Jan 30, 2019Updated 7 years ago