josephryan / alien_indexLinks
identify potential non-animal transcripts in animal transcriptomes
☆11Updated 5 years ago
Alternatives and similar repositories for alien_index
Users that are interested in alien_index are comparing it to the libraries listed below
Sorting:
- ☆33Updated 4 years ago
- A tool to identify and annotate homoplasies on a phylogeny and sequence alignment☆20Updated 4 years ago
- Alignment-based retrieval and concatenation of phylogenetic markers from whole genome sequence (WGS) data☆36Updated last year
- ☆45Updated 8 years ago
- STAG: Species Tree from All Genes☆34Updated 6 years ago
- Automated de novo assembly of whole chloroplast genomes.☆47Updated last year
- Perl script for manipulating multiple sequence alignments for phylogenetic reconstruction☆11Updated 11 years ago
- DFOIL: Introgression Testing for Five Taxa☆33Updated 4 years ago
- A shiny application to visualize MCscan result☆37Updated 3 years ago
- Generates an NCBI .tbl file of annotations on a genome.☆68Updated 7 years ago
- A python script for finding telomeric repeats (TTAGGG/CCCTAA) in FASTA files☆35Updated 3 years ago
- Read, manipulate and visualize 'Pairwise mApping Format' data in R☆76Updated 4 years ago
- Scripts to estimate genome size and coverage from kmer distribution generated by jellyfish☆57Updated 2 years ago
- Workflow for detecting genome-wide horizontal gene transfers☆10Updated 7 years ago
- use paired-end transcriptome reads to scaffold genomes☆11Updated 6 years ago
- Code for computing various support scores for internodes☆19Updated 5 years ago
- TSEBRA: Transcript Selector for BRAKER☆49Updated 3 weeks ago
- Genome Annotation Pipeline☆42Updated last year
- ☆32Updated this week
- Improve the quality of a denovo assembly by scaffolding and gap filling☆57Updated 4 years ago
- Helper scripts for processing and visualization of phylogenetics datasets☆30Updated last year
- Synteny Imager☆65Updated last month
- Data analysis of Funannotate and Orthofinder outputs to Pangenome results☆23Updated 5 years ago
- A massively parallel tool for model selection and tree inference on thousands of genes☆50Updated last year
- ☆18Updated 5 years ago
- Gapless provides combined scaffolding, gap-closing and assembly correction with long reads☆38Updated 2 years ago
- TGS scaffolding