ZhenyiWangTHU / HemaScopeRView external linksLinks
a user-friendly and modular design R package tailored for analyzing single-cell and spatial transcriptome sequencing data of hematopoietic cells
☆18Apr 17, 2025Updated 10 months ago
Alternatives and similar repositories for HemaScopeR
Users that are interested in HemaScopeR are comparing it to the libraries listed below
Sorting:
- ☆16Sep 17, 2025Updated 5 months ago
- <Bioinformatics> scCancer2: data-driven in-depth annotations of the tumor microenvironment at single-level resolution☆27Aug 27, 2025Updated 5 months ago
- ESICCC: A systematic computational framework for evaluation, selection and integration of cell-cell communication inference methods☆12Jan 10, 2024Updated 2 years ago
- ☆22Nov 11, 2024Updated last year
- A set of processes/pipelines for bioinformatics☆14Updated this week
- an efficient Hi-C data processing pipeline☆17Mar 26, 2024Updated last year
- Refining the impact of genetic evidence on clinical success☆27Jul 14, 2024Updated last year
- The scripts used for analyzing JAX mouse dataset☆27Oct 24, 2024Updated last year
- bioinformatics for peter☆11Apr 8, 2025Updated 10 months ago
- A method which leverages scRNA-seq data to achieve two goals: (1) to infer the cell types in which the disease-associated genes manifest …☆26Sep 20, 2022Updated 3 years ago
- Reproducing all analyses and figures for the ASAP-seq paper☆29Jun 11, 2021Updated 4 years ago
- Anki decks for Technion courses☆13Apr 26, 2024Updated last year
- Course repo for material related to CYPLAN 255 at UC Berkeley, Spring 2024☆11May 7, 2024Updated last year
- Functions for single cell data analysis☆32May 28, 2021Updated 4 years ago
- Homework for STAT 205A - Berkeley☆13Dec 9, 2014Updated 11 years ago
- A Reproducible Untargeted Metabolomics Data Processing Pipeline☆11Mar 18, 2021Updated 4 years ago
- Quickstart tutorial Prerequisites Before reading this tutorial you should know a bit of Python. If you would like to refresh your memory,…☆13Dec 14, 2021Updated 4 years ago
- Course Projects for CS 61B, the data structures class at UC Berkeley, Spring 2014☆10Oct 7, 2014Updated 11 years ago
- ☆14Jun 24, 2024Updated last year
- Effects of Adherence to Mediterranean and MIND Diets, and the Mediating Effect of Metabolites on Risks of Overall and 22 Specific Cancers…☆13Apr 10, 2024Updated last year
- A Python package for amino acid sequence analysis. Proforma 2.1 complicant.☆14Feb 6, 2026Updated last week
- ☆40Aug 29, 2025Updated 5 months ago
- geoRge: a computational tool for stable isotope labelling detection in LC/MS-based untargeted metabolomics☆11Sep 17, 2021Updated 4 years ago
- metabCombiner R Package: Paired Untargeted Metabolomics Feature Matching & Data Concatenation☆13May 29, 2024Updated last year
- Segmentation-free Analysis of In Situ Capture data☆13Jan 5, 2026Updated last month
- This is the repo for CROssBARv2 Knowledge Graph data. CROssBARv2 is a heterogeneous general-purpose biomedical KG-based system.☆11Feb 4, 2026Updated last week
- R code for Combining gene mutation with gene expression data improves outcome prediction in myelodysplastic syndromes☆13Mar 23, 2016Updated 9 years ago
- ☆11Feb 11, 2023Updated 3 years ago
- MTAE-based 5UTR design model☆10Jan 23, 2024Updated 2 years ago
- self study java, through cs61b (http://www.cs.berkeley.edu/~jrs/61b/)☆10Jul 9, 2013Updated 12 years ago
- The OpenCV matchTemplate primitive for gpu has been adapted in order to enable calculations on 32-bit floating-point raw data.☆10Feb 11, 2018Updated 8 years ago
- ☆11Feb 1, 2023Updated 3 years ago
- Deep Neural Network course @ UC Berkeley, taken Spring 2019☆10Dec 7, 2022Updated 3 years ago
- general repo that holds all analysis and figures for the thymus spatial atlas by Yayon, Kedlian, Boehme, Radtke and many more!☆12Nov 20, 2024Updated last year
- This repo is archived, the these workflows are still available in the GATK repository under the scripts directory. The workflows are also…☆11Mar 9, 2020Updated 5 years ago
- Notes for "Introduction to Systems Programming" - 234124 (Technion)☆13Jul 3, 2022Updated 3 years ago
- Single-cell genomic sequencing of the human gut microbiome☆12Jun 12, 2024Updated last year
- Deep Learning Scaling tutorial material for the Deep Learning for Science School at Berkeley Lab☆10Jul 19, 2019Updated 6 years ago
- ☆12Jan 31, 2023Updated 3 years ago