Alternatives and similar repositories for HemaScopeR

Users that are interested in HemaScopeR are comparing it to the libraries listed below

• ChengxiangQiu / JAX_code
  The scripts used for analyzing JAX mouse dataset
  ☆25Updated 11 months ago
• data2intelligence / CytoSig_prediction
  Example of run CytoSig and reproduce prediction results on bulk and single-cell cohorts
  ☆14Updated 2 years ago
• saezlab / MetaProViz
  R-package to perform metabolomics pre-processing, differential metabolite analysis, metabolite clustering and custom visualisations.
  ☆16Updated this week
• wwylab / DeMixT
  ☆37Updated this week
• ed-lau / jcast
  Junction centric alternative splicing translator
  ☆20Updated 2 years ago
• netbiolab / scHumanNet
  Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3
  ☆44Updated last month
• broadinstitute / single_cell_classification
  Methods to use SNPs or gene expression to classify single cell RNAseq to reference profiles
  ☆29Updated 5 years ago
• showteeth / GEfetch2R
  GEfetch2R - Access Single-cell/Bulk RNA-seq Data from Public Repositories and Benchmark the Subsequent Format Conversion Tools
  ☆37Updated 6 months ago
• Xiang-HF-Zhang / Dichotomous-of-innate-immune-landscape
  Dichotomous of innate immune landscape
  ☆17Updated 6 years ago
• ajwilk / 2020_Wilk_COVID
  Reproducibility repository accompanying Wilk, Rustagi, Zhao, et al. "A single-cell atlas of the peripheral immune response to severe COVI…
  ☆49Updated 3 years ago
• shenorrLabTRDF / bseqsc
  Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline
  ☆46Updated 2 years ago
• Teichlab / cell2tcr
  Inference of TCR motifs
  ☆32Updated 3 months ago
• lydiaMyr / ImmuCellAI-mouse
  ☆10Updated 4 months ago
• olapuentesantana / easier
  R package to use EaSIeR to predict anti-tumor immune response from bulk RNA-seq
  ☆15Updated 9 months ago
• OSU-BMBL / BMBL-analysis-notebooks
  A collection of bioinformatics data analysis notebooks focused on providing examples of current best practices in sequencing data analysi…
  ☆14Updated 3 months ago
• RMolania / TCGA_PanCancer_UnwantedVariation
  ☆48Updated last year
• xushiabbvie / TDtool
  ☆11Updated 11 months ago
• SlavovLab / SCoPE2
  ☆18Updated 5 months ago
• dbdimitrov / BingleSeq
  BingleSeq - A user-friendly R package for Bulk and Single-cell RNA-Seq data analyses
  ☆22Updated 4 years ago
• mvanins / scRiboSeq_manuscript
  ☆10Updated 4 years ago
• junjunlab / bulkPseudotime
  Pseudotime Analysis for Bulk Data
  ☆17Updated last year
• olapuentesantana / easier_manuscript
  ☆15Updated 4 years ago
• weililab / scMAGeCK
  The R Bioconductor package for scMAGeCK.
  ☆13Updated last year
• GreenleafLab / motifmatchr
  Fast motif matching in R
  ☆46Updated last year
• bzhanglab / OmicsEV
  A tool for large scale omics datasets evaluation
  ☆25Updated 2 years ago
• ZilongZhang44 / single-cell-downstream-analysis
  Critical downstream analysis steps for single-cell RNA sequencing data
  ☆13Updated 4 years ago
• jason-weirather / CIBERSORT
  A shell to facilitate loading / running CIBERSORT software in structured environments
  ☆26Updated 7 years ago
• xiebb123456 / AutomaticCellTypeIdentification
  ☆19Updated 3 years ago
• mildpiggy / DEP2
  An r package for proteomics data Analysis, developed from DEP.
  ☆30Updated 6 months ago
• shmohammadi86 / SCINET
  ☆18Updated 4 years ago