Multi-omics multi-layered network integration and interpretation
☆14Oct 15, 2024Updated last year
Alternatives and similar repositories for netOmics
Users that are interested in netOmics are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- This repository contains code associated with the study "Proteomic signatures improve risk predictions for common and rare diseases" (DOI…☆20Jul 3, 2024Updated 2 years ago
- ☆13Jan 26, 2025Updated last year
- PyIOmica (pyiomica) is a Python package for omics analyses.☆16Oct 6, 2025Updated 9 months ago
- Code, scripts, some logs and general misc. from to the RNA viruses in MetaTranscriptome discovery project.☆12Jan 5, 2023Updated 3 years ago
- R interface to Chemical Translation Service (CTS)☆17Jul 27, 2024Updated last year
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- ☆13Feb 5, 2022Updated 4 years ago
- ☆22Jan 16, 2026Updated 6 months ago
- ☆29May 20, 2023Updated 3 years ago
- DIABLO - an integrative multi-group, multi-dataset classification method☆29Feb 26, 2019Updated 7 years ago
- ☆11Mar 25, 2019Updated 7 years ago
- Quickly get coverage statistics given reads and an assembly☆17May 13, 2024Updated 2 years ago
- QTL Discovery using Annotations☆29Dec 12, 2022Updated 3 years ago
- ☆21Updated this week
- A simple nextflow pipeline for running kraken2 and bracken in a docker container☆21Oct 8, 2025Updated 9 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- An R package for ECM molecule annotation, classification, and analysis☆14Sep 20, 2024Updated last year
- Temporal Development of the Gut Microbiome in Early Childhood - The TEDDY Study☆11Jul 13, 2018Updated 8 years ago
- A manually curated database of literature-supported ligand-receptor interactions in human and mouse☆37Jul 1, 2024Updated 2 years ago
- Annotation of Metabolite Origin via Networks: A tool for predicting putative metabolite origins for microbes or between microbes and host…☆26Jun 3, 2026Updated last month
- Batch effects removal for microbiome data via conditional quantile regression☆33Aug 23, 2022Updated 3 years ago
- ☆13Feb 19, 2021Updated 5 years ago
- Classification of Single cells by Transfer Learning☆11Oct 11, 2025Updated 9 months ago
- Inferring cell-cell interactions from pseudotime ordering of scRNA-Seq data☆26Jan 11, 2023Updated 3 years ago
- Powerful and robust non-parametric association testing for microbiome data via a zero-inflated quantile approach☆12Mar 21, 2024Updated 2 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- PaNeV: an R package for a pathway-based network visualization☆10Aug 25, 2025Updated 10 months ago
- Goslin is the Grammar on succinct lipid nomenclature.☆13Jun 18, 2026Updated last month
- Protocols, data and code associated with the MK-SpikeSeq method for quantifying the absolute abundances of microbiota samples☆12May 19, 2021Updated 5 years ago
- BinaRena: Interactive Visualization and Binning of Metagenomic Contigs☆33Aug 22, 2024Updated last year
- Cluster Evaluation R package (ClueR) for detecting key signaling events from time-series phosphoproteomics data☆11Jan 10, 2024Updated 2 years ago
- COmpositional Zero-Inflated Network Estimation☆11Nov 20, 2023Updated 2 years ago
- A GWAS course☆12Nov 4, 2021Updated 4 years ago
- ☆13Oct 4, 2022Updated 3 years ago
- A tool for distinguish temperate phage-derived and virulent phage-derived sequence in metavirome data using deep learning☆27Nov 20, 2023Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆13Jan 12, 2024Updated 2 years ago
- Python package for compositional data analysis including CLR/ILR, proportionality, partial correlation with basis shrinkage, and visualiz…☆30May 11, 2026Updated 2 months ago
- LaTeX template of graduate Thesis [University of Chinese Academy of Sciences]☆12Nov 7, 2017Updated 8 years ago
- VAE package for reproducible generative models of biological data☆13Nov 28, 2024Updated last year
- 🏆 A ranked list of awesome machine learning Python libraries. Updated weekly.☆12Jan 17, 2021Updated 5 years ago
- Code for the meQTL analyses presented in Hawe et al. 2021 Nature Genetics☆14Jan 14, 2022Updated 4 years ago
- A containerized bioinformatics pipeline for viral metagenomic data analysis☆39Apr 9, 2026Updated 3 months ago