abodein / netOmicsLinks
Multi-omics multi-layered network integration and interpretation
☆14Updated last year
Alternatives and similar repositories for netOmics
Users that are interested in netOmics are comparing it to the libraries listed below
Sorting:
- Tutorial Website☆60Updated 4 years ago
- Convert Counts to Fragments per Kilobase of Transcript per Million (FPKM)☆63Updated 4 years ago
- ☆10Updated 5 years ago
- RNAseq pipeline based on snakemake☆26Updated 2 years ago
- Motif manipulation functions for R.☆30Updated last month
- Time-Course Multi-Omics data integration☆26Updated last year
- A list of alternative splicing analysis resources☆46Updated 7 months ago
- Integrative pathway enrichment analysis of multivariate omics data☆117Updated 4 months ago
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆41Updated 3 years ago
- CLIP-seq Analysis of Multi-mapped reads☆31Updated 4 years ago
- A toolkit for QC and visualization of ATAC-seq results.☆72Updated 10 months ago
- Estimation of Promoter Activity from RNA-Seq data☆56Updated 4 months ago
- From RNA-seq raw reads to enriched pathways by DEGs☆33Updated last year
- Identifying genome-wide translated open reading frames using ribosome profiling☆23Updated 2 years ago
- Workflows for processing RNA data for germline short variant discovery with GATK v4 and related tools☆81Updated 4 years ago
- A pipeline to identify pathogenic microorganisms from scRNA-seq raw data.☆28Updated 2 years ago
- REDItools are python scripts to investigate RNA editing at genomic scale.☆68Updated 4 months ago
- A toolset for profiling alternative splicing events in RNA-Seq data.☆82Updated 9 months ago
- DCC/DAC methylation pipeline source☆57Updated 5 years ago
- RNA editing quantification in deep transcriptome data☆15Updated 4 months ago
- Arabidopsis RNA_-seq downstream analysis shiny app☆30Updated 6 years ago
- An R package to Identify, Annoatate and Visialize Isoform Switches with Functional Consequences (from RNA-seq data)☆120Updated last month
- RepEnrich is a method to estimate repetitive element enrichment using high-throughput sequencing data.☆28Updated 3 years ago
- optimization of ribosome P-site positioning in ribosome profiling data☆55Updated 8 months ago
- A bioconductor package with minimalist design for drawing elegant tracks or lollipop plot☆74Updated 2 weeks ago
- Unsorted scripts for bioinformatics☆61Updated 4 years ago
- A modular, containerized pipeline for ATAC-seq data processing☆60Updated last month
- Workshop • Analysis of RNA-seq data☆37Updated last year
- tools to find circRNAs in RNA-seq data☆44Updated 8 years ago
- Enhanced version of the FastQTL QTL mapper☆70Updated 2 years ago