NourMarzouka / multiclassPairsLinks
Build single sample pair-based (rule-based) classifiers using top-score pairs or random forest for multi-class problems.
☆13Updated 2 years ago
Alternatives and similar repositories for multiclassPairs
Users that are interested in multiclassPairs are comparing it to the libraries listed below
Sorting:
- Explore the cancer relevance of your gene list☆52Updated 2 months ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 3 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆30Updated last year
- DriverPower☆26Updated 10 months ago
- ☆29Updated last year
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated this week
- Pipeline to call neoantigens from intron retention events derived from RNA-Seq data.☆28Updated 4 years ago
- iread☆25Updated 4 years ago
- Combined mutation recurrence and functional impact to identify coding and non-coding cancer drivers☆15Updated 7 years ago
- BANDITS: Bayesian ANalysis of DIfferenTial Splicing☆18Updated last month
- ☆17Updated last year
- Workflow for Sequenza, cellularity and ploidy☆24Updated 3 months ago
- Flexible Bayesian inference of mutational signatures☆37Updated 2 years ago
- An R package for Splice-aware quantification of translation using Ribo-seq data☆19Updated last year
- Comprehensive Human Expressed SequenceS☆18Updated 4 months ago
- ORF Quantification pipeline for Alternative Splicing☆16Updated 4 years ago
- Differential analysis of multi-omics data based on the Tweedie distribution☆28Updated last year
- The `multiGSEA` R package was designed to run a robust GSEA-based pathway enrichment for multiple omics layers.☆20Updated 2 weeks ago
- ☆29Updated 2 years ago
- ☆31Updated last year
- deepStats: a stastitical toolbox for deeptools and genomic signals☆35Updated 4 years ago
- 📊 An R package of RNA-seq workflow☆15Updated 3 years ago
- A tool kit for dissecting cancer evolution from multi-region derived tumor biopsies via somatic mutations☆35Updated 3 years ago
- Scripts to install as a Bioconda package for making workflows☆17Updated last year
- An R for fast and flexible DNA methylation analysis☆34Updated last month
- A single cell sequencing read simulator.☆33Updated last year
- Pipeline for Quality Control of Ribo-Seq data, selection of P-site offsets, and codon usage statistics.☆18Updated 2 years ago
- Create a cromphensive report of DEG list coming from any analysis of RNAseq data☆26Updated last month
- Scripts and software supplement for "Gene-level differential analysis at transcript-level resolution" by Yi, Pimentel, Bray and Pachter☆19Updated 7 years ago
- Clone of the Bioconductor repository for the RUVSeq package, see https://bioconductor.org/packages/devel/bioc/html/RUVSeq.html for the of…☆14Updated 2 years ago