BioinfoUNIBA / REDItools2Links
☆58Updated last month
Alternatives and similar repositories for REDItools2
Users that are interested in REDItools2 are comparing it to the libraries listed below
Sorting:
- REDItools are python scripts to investigate RNA editing at genomic scale.☆68Updated last month
- A tool for the calculation of RNA-editing index for RNA seq data☆43Updated last year
- A method for circular DNA detection based on probabilistic mapping of ultrashort reads☆65Updated last year
- A Perl/R pipeline for plotting metagenes☆37Updated 3 years ago
- Software for Quantifying Interspersed Repeat Expression☆61Updated 3 years ago
- perl cworld module and collection of utility/analysis scripts for C data (3C, 4C, 5C, Hi-C)☆67Updated 6 years ago
- A package for quantifying transposable elements at a locus level for RNAseq datasets.☆28Updated 6 months ago
- Full-length transcriptome splicing and mutation analysis☆84Updated last year
- GIREMI is a method that can identify RNA editing sites using one RNA-seq data set without requiring genome sequence data.☆44Updated 8 years ago
- ☆62Updated last year
- Allele-specific alignment sorting☆58Updated 2 years ago
- HiC uniform processing pipeline☆60Updated last year
- Workflows for processing RNA data for germline short variant discovery with GATK v4 and related tools☆79Updated 3 years ago
- Single Cell Long Read is a suite of tools dedicated to Cell barcode / UMI assignment and analysis of highly multiplexed single cell Nanop…☆75Updated 2 years ago
- Quantification of transposable element expression using RNA-seq☆74Updated last year
- Dynamics analysis of Alternative PolyAdenylation from RNA-seq☆61Updated last year
- SpecHLA reconstructs entire diploid sequences of HLA genes and infers LOH events. It supports HLA-A, -B, -C, -DPA1, -DPB1, -DQA1, -DQB1, …☆49Updated last week
- release version☆54Updated 3 years ago
- trackplot is a tool for visualizing various next-generation sequencing (NGS) data, including DNA-seq, RNA-seq, single-cell RNA-seq and fu…☆97Updated 3 months ago
- Tools for analyzing DNA methylation data☆43Updated last week
- ☆45Updated 2 years ago
- optimization of ribosome P-site positioning in ribosome profiling data☆52Updated 6 months ago
- ☆50Updated 6 years ago
- FEELnc : FlExible Extraction of LncRNA☆90Updated last month
- A list of alternative splicing analysis resources☆46Updated 5 months ago
- toolbox for analysing BS-seq data, advance features in SNV, ASM and DMR☆62Updated last year
- Publication quality NGS track plotting☆114Updated 3 years ago
- Ribo-seq TIS Hunter, predicting translation initiation sites and ORFs using riboseq data☆43Updated 8 months ago
- A toolset for profiling alternative splicing events in RNA-Seq data.☆82Updated 7 months ago
- ENCODE long read RNA-seq pipeline☆50Updated 2 years ago