sacanlab / immunotarLinks
☆16Updated 8 months ago
Alternatives and similar repositories for immunotar
Users that are interested in immunotar are comparing it to the libraries listed below
Sorting:
- Multi-omics profiling of peripheral immune system response to SARS-CoV-2 infection☆41Updated 4 years ago
- scWGCNA☆61Updated 3 years ago
- ☆48Updated last year
- Pipeline for characterizing metebolic heterogeneity from single-cell RNA-seq data☆22Updated 4 years ago
- Reproducibility repository accompanying Wilk, Rustagi, Zhao, et al. "A single-cell atlas of the peripheral immune response to severe COVI…☆49Updated 4 years ago
- scRNA-seq cell type identification☆43Updated 6 years ago
- ☆39Updated 4 years ago
- Single-cell Case Control Analysis☆52Updated 3 weeks ago
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆47Updated last year
- ☆34Updated 6 years ago
- ConsensusTME Gene Sets and R Script☆39Updated last year
- Cluster single cells and analyze cell clade relationships with colorful visualizations.☆46Updated 4 years ago
- A unified interface to spatial transcriptomics deconvolution tools☆45Updated this week
- ☆32Updated 3 years ago
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆44Updated 4 months ago
- NATMI: Network Analysis Toolkit for the Multicellular Interactions☆35Updated 4 years ago
- R-package for the analysis of single-cell TCR/BCR data in the Seurat ecosystem☆20Updated 8 months ago
- This is a tutorial to guide the analysis of RNAseq dataset using footprint based tools such as DOROTHEA, PROGENY and CARNIVAL☆56Updated 2 years ago
- Standalone shiny server container for viewing CellChat object☆12Updated 4 years ago
- ☆19Updated 3 years ago
- Gene regulatory network containing signed transcription factor-target gene interactions☆93Updated 7 months ago
- CDSeq R Package☆21Updated 6 months ago
- Gene Set + S2G strategy annotations analyzed for disease architecture☆58Updated 3 years ago
- ☆17Updated 6 years ago
- scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data☆31Updated 3 years ago
- ☆41Updated 4 years ago
- identifying disease critical cell types and programs from single cell RNAseq☆58Updated 3 years ago
- ☆12Updated 5 years ago
- A suite of population scale analysis tools for single-cell genomics data including implementation of Demuxlet / Freemuxlet methods and au…☆58Updated 4 years ago
- A R package for integrated scRNA-seq data analysis using the RPCI algorithm☆44Updated last year