Transcript assembly tool using multiple change-point inference to improve 3'UTR annotation
☆13Dec 2, 2022Updated 3 years ago
Alternatives and similar repositories for isoscm
Users that are interested in isoscm are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Normalization and difference calling for Next Generation Sequencing (NGS) data via joint multinomial modeling.☆11May 21, 2026Updated last month
- ☆15Mar 6, 2018Updated 8 years ago
- Systematic analyses of intronic polyadenylation from standard RNAseq data☆18Sep 10, 2024Updated last year
- R function to plot high quality, elegant heatmap using 'ggplot2' graphics . Some of the important features of this package are, colorin…☆11Apr 19, 2016Updated 10 years ago
- A fast and efficient short read mapper☆13Nov 7, 2021Updated 4 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Processing and analysis of data coming from Illumina sequencing machines☆11Jul 10, 2026Updated last week
- AlignerBoost is a generalized software toolkit for boosting Next-Gen sequencing mapping precision using a Bayesian based mapping quality …☆11Mar 1, 2022Updated 4 years ago
- 🌓 Allele specific analyses across cell states and conditions☆11Nov 28, 2022Updated 3 years ago
- A deletion finder through re-aligning the whole soft-clipping read☆12Jul 2, 2016Updated 10 years ago
- A tool for Read Multi-Mapper Resolution☆24Feb 15, 2017Updated 9 years ago
- A software for the multispecies design of CRISPR/Cas9 libraries☆38Oct 7, 2022Updated 3 years ago
- NGS perl modules☆10Jul 13, 2026Updated last week
- ☆12Jan 21, 2016Updated 10 years ago
- apa: research platform for the study of alternative polyadenylation, expressRNA.org☆12Sep 2, 2021Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- COMETgazer mehylation analysis software suite☆10Jul 21, 2019Updated 6 years ago
- example applications built using bíogo☆18Apr 19, 2021Updated 5 years ago
- RNF framework for NGS: simulation of reads, evaluation of mappers, conversion of RNF-compliant data.☆14Nov 10, 2025Updated 8 months ago
- Gordon's Text utils Library☆10Apr 11, 2022Updated 4 years ago
- Rcount: simple and flexible RNA-Seq read counting☆12May 19, 2022Updated 4 years ago
- Long Approximate Matches-based Split Aligner☆13Apr 6, 2017Updated 9 years ago
- Targeted Amplicon Bisulfite Sequencing Analysis Tool☆11May 8, 2019Updated 7 years ago
- ☆13Apr 14, 2026Updated 3 months ago
- R package to quickly obtain count vectors from indexed bam files☆15May 21, 2026Updated 2 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Estimation of pairwise distances under a probabilistic framework☆11Aug 11, 2023Updated 2 years ago
- Peakzilla is a self-learning algorithm to identify transcription factor binding sites from ChIP-seq data. I would be very happy if you tr…☆21Aug 18, 2025Updated 11 months ago
- Next generation sequencing (NGS/HTS) tools.☆19Jan 25, 2024Updated 2 years ago
- DeeNA Zip (SAM/BAM compression tool)☆13May 25, 2019Updated 7 years ago
- An application to remove PCR duplicates from high throughput sequencing runs.☆11Apr 22, 2018Updated 8 years ago
- A Modern Perl Framework for High Throughput Sequencing analysis☆17May 6, 2020Updated 6 years ago
- Cross-platform GUI desktop application for making biological heatmaps☆19Nov 10, 2022Updated 3 years ago
- Python wrapper around the popular ChIP-Seq peak caller SICER☆15Dec 7, 2017Updated 8 years ago
- WALT is a read mapping program for bisulfite sequencing DNA methylation studies.☆17Aug 23, 2022Updated 3 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- ☆15Oct 19, 2023Updated 2 years ago
- de Bruijn Graph REAd mapping Tool☆14Jul 12, 2017Updated 9 years ago
- GEMTools main repository☆17Jun 21, 2022Updated 4 years ago
- Download binary executables and sample data here:☆18Oct 28, 2016Updated 9 years ago
- Pipeline for testing shifts in poly(A) tail lengths estimated by nanopolish☆10May 5, 2020Updated 6 years ago
- software for analysis of chromatin feature occupancy profiles from high-throughput sequencing data☆18Nov 26, 2019Updated 6 years ago
- An interactive Shiny web application for genomic interval enrichment analysis using LOLA.☆16Apr 17, 2022Updated 4 years ago