hyulab / PINTS
☆13Updated this week
Alternatives and similar repositories for PINTS
Users that are interested in PINTS are comparing it to the libraries listed below
Sorting:
- Code to calculate the Splicing Z Score (SpliZ) for single cell RNA-seq splicing analysis☆32Updated 3 years ago
- ☆49Updated 9 months ago
- ☆18Updated last year
- ☆17Updated 4 years ago
- ☆27Updated 3 years ago
- Preprocesses and Aligns Run-On Sequencing (PRO/GRO/ChRO-seq) data from Single-Read or Paired-End Illumina Sequencing☆27Updated 5 months ago
- ☆22Updated 11 months ago
- CLIP-seq Analysis of Multi-mapped reads☆30Updated 3 years ago
- ROSE: RANK ORDERING OF SUPER-ENHANCERS☆47Updated 9 months ago
- single-cell-Isoform-Sequencing-Analysis-Tools: New and powerful tools brings single-cell RNA sequencing to the Isoform level and single m…☆24Updated 9 months ago
- Detection and couting alternative TSS in single cells☆14Updated last year
- Snakemake pipeline for plate scATAC-seq processing☆26Updated last year
- 🍹This repo includes the scripts and analysis notebook for the Droplet Hi-C manuscript☆13Updated 3 weeks ago
- MAnorm2 for Normalizing and Comparing ChIP-seq Samples☆32Updated 2 years ago
- Nextflow implementation of SpliZ☆14Updated last year
- Dynamic Analysis of Alternative Polyadenylation from single-cell RNA-seq (scDaPars)☆15Updated 3 years ago
- A Deep Learning-Based Model for Quantifying Transposable Elements in Single-Cell Sequencing Data☆27Updated last month
- Pipelines to create and analyze ENCODE candidate cis-Regulatory Elements☆23Updated 4 months ago
- scripts for the integrating ATAC-seq, RNA-seq and CHi-C paper☆24Updated 2 years ago
- A rapid and robust plate-based single cell ATAC-seq (scATAC-seq) method☆43Updated 4 years ago
- A modular, containerized pipeline for ATAC-seq data processing☆57Updated last month
- Cell type specific enrichments using finemapped variants and quantitative epigenetic data☆45Updated last year
- single-cell clustering based on alternative splicing landscapes☆20Updated last year
- ☆14Updated 4 years ago
- interactive visualization of single-cell transcriptomes☆11Updated last year
- Bioinformatics pipeline for single-cell 3' UTR isoform quantification☆22Updated 5 months ago
- HiC for copy Number variation and Translocation detection☆39Updated 3 years ago
- This is a package and a shell script for alternative polyadenylation (APA) analysis of 3' tag single-cell RNA-seq data.☆19Updated 3 years ago
- ☆32Updated 5 years ago
- ☆34Updated 5 years ago