hyulab / PINTSLinks
☆14Updated 8 months ago
Alternatives and similar repositories for PINTS
Users that are interested in PINTS are comparing it to the libraries listed below
Sorting:
- ☆53Updated last year
- Code to calculate the Splicing Z Score (SpliZ) for single cell RNA-seq splicing analysis☆35Updated 4 years ago
- Nextflow implementation of SpliZ☆15Updated 2 years ago
- ROSE: RANK ORDERING OF SUPER-ENHANCERS☆63Updated 2 months ago
- ATAC-seq processing pipeline☆34Updated 3 years ago
- Preprocesses and Aligns Run-On Sequencing (PRO/GRO/ChRO-seq) data from Single-Read or Paired-End Illumina Sequencing☆30Updated last year
- ☆19Updated 2 years ago
- ☆30Updated 4 years ago
- ☆25Updated 4 years ago
- This is a package and a shell script for alternative polyadenylation (APA) analysis of 3' tag single-cell RNA-seq data.☆24Updated 4 years ago
- Analysis of Paired-Tag datasets☆43Updated 2 years ago
- Single Cell Analysis of Five'Ends☆50Updated last year
- A Deep Learning-Based Model for Quantifying Transposable Elements in Single-Cell Sequencing Data☆32Updated last month
- single-cell-Isoform-Sequencing-Analysis-Tools: New and powerful tools brings single-cell RNA sequencing to the Isoform level and single m…☆26Updated last year
- single-cell clustering based on alternative splicing landscapes☆23Updated last year
- Pipelines to create and analyze ENCODE candidate cis-Regulatory Elements☆28Updated last month
- Bioconductor package esATAC: an Easy-to-use Systematic pipeline for ATAC-seq data analysis☆23Updated 3 years ago
- Repository for Cibersortx☆62Updated 4 years ago
- Code and analysis pipeline for Smart-seq3 (Hagemann-Jensen et al. 2020).☆57Updated 4 years ago
- Enhanced and elegant flexible peak/loop/domain -calling and analysis tool for 1D/3D genomic data.☆52Updated 7 months ago
- Tools to analyze Dip-C (or other 3C/Hi-C) data☆74Updated last year
- Scripts for the analysis of TT-seq and DRB/TT-seq data.☆11Updated 5 years ago
- MAnorm2 for Normalizing and Comparing ChIP-seq Samples☆32Updated 3 years ago
- BRIE: Bayesian Regression for Isoform Estimate in Single Cells☆42Updated last year
- scripts for the integrating ATAC-seq, RNA-seq and CHi-C paper☆25Updated 3 years ago
- ☆25Updated 3 months ago
- CLIP-seq Analysis of Multi-mapped reads☆31Updated 4 years ago
- RNA editing tests☆17Updated 5 years ago
- Tutorial Website☆63Updated 5 years ago
- Pileup biallelic SNPs from single-cell and bulk RNA-seq data☆83Updated 3 years ago