hyulab / PINTS
☆13Updated last month
Related projects ⓘ
Alternatives and complementary repositories for PINTS
- Code to calculate the Splicing Z Score (SpliZ) for single cell RNA-seq splicing analysis☆29Updated 2 years ago
- Nextflow implementation of SpliZ☆12Updated last year
- CLIP-seq Analysis of Multi-mapped reads☆28Updated 3 years ago
- Tutorial Website☆53Updated 3 years ago
- Single Cell Analysis of Five'Ends☆45Updated 8 months ago
- RNAmotifs is an integrated R, C++, python softwares that evaluates the sequence around differentially regulated alternative exons to iden…☆9Updated 6 years ago
- Preprocesses and Aligns Run-On Sequencing (PRO/GRO/ChRO-seq) data from Single-Read or Paired-End Illumina Sequencing☆24Updated 2 months ago
- ☆19Updated 5 months ago
- scripts for the integrating ATAC-seq, RNA-seq and CHi-C paper☆23Updated 2 years ago
- SEASTAR - Systematic Evaluation of Alternative transcription STArt site in RNA☆13Updated 6 years ago
- ☆40Updated 3 months ago
- ☆15Updated 2 months ago
- Snakemake pipeline for plate scATAC-seq processing☆26Updated 11 months ago
- MAnorm2 for Normalizing and Comparing ChIP-seq Samples☆32Updated 2 years ago
- ☆18Updated last year
- Discover differential transcript usage from polyA-captured single cell RNA-seq data☆49Updated last year
- Statistically Significant loops from HiChIP data☆39Updated 7 months ago
- ☆14Updated 3 years ago
- ☆27Updated 3 months ago
- splicekit: an integrative toolkit for splicing analysis from short-read RNA-seq☆15Updated this week
- Code repo for all analysis done for the 'Pan-cancer whole genome comparison of primary and metastatic solid tumors' study.☆14Updated last year
- RNA editing tests☆16Updated 4 years ago
- A modular, containerized pipeline for ATAC-seq data processing☆54Updated last week
- ☆24Updated 3 years ago
- single-cell-Isoform-Sequencing-Analysis-Tools: New and powerful tools brings single-cell RNA sequencing to the Isoform level and single m…☆23Updated 4 months ago
- A rapid and robust plate-based single cell ATAC-seq (scATAC-seq) method☆43Updated 3 years ago
- ☆33Updated 5 years ago
- ☆31Updated 5 years ago
- Scripts to import your FeatureCounts output into DEXSeq☆31Updated 6 years ago
- a toolset for mining multi-dimensional features of the translatome with ribosome profiling data☆14Updated 4 months ago