gxiaolab / mountainClimber
☆20Updated 5 years ago
Alternatives and similar repositories for mountainClimber:
Users that are interested in mountainClimber are comparing it to the libraries listed below
- CLIP-seq Analysis of Multi-mapped reads☆29Updated 3 years ago
- A statistical tool to detect differential alternative splicing events using single-cell RNA-seq☆22Updated last year
- Identifying genome-wide translated open reading frames using ribosome profiling☆21Updated last year
- SEASTAR - Systematic Evaluation of Alternative transcription STArt site in RNA☆13Updated 7 years ago
- ☆15Updated 2 years ago
- TIMEOR: Trajectory Inference and Mechanism Exploration with Omics Data in R☆16Updated 3 years ago
- RNAmotifs is an integrated R, C++, python softwares that evaluates the sequence around differentially regulated alternative exons to iden…☆9Updated 6 years ago
- Public repository containing research code for the TCGA PanCanAtlas Splicing project☆41Updated 4 years ago
- Comprehensive analysis of small RNA sequencing data☆31Updated 8 months ago
- simplified cellranger for long-read data☆18Updated 5 months ago
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆38Updated 3 years ago
- Epimap processing and analysis code repository☆33Updated 2 years ago
- Detection of Circular RNA and Fusions from RNA-Seq☆32Updated 6 years ago
- Bioinformatic tool for Splice site Strength Estimation using RNA-seq☆14Updated 2 years ago
- direct comparison of circular and linear RNA expression☆21Updated 4 years ago
- splicekit: an integrative toolkit for splicing analysis from short-read RNA-seq☆16Updated this week
- Estimation of Promoter Activity from RNA-Seq data☆50Updated 3 years ago
- Identifying differentially methylated regions from MethylC-seq (bisulfite-sequencing) data☆27Updated last year
- ☆23Updated 3 years ago
- Motif manipulation functions for R.☆28Updated 3 months ago
- Demultiplexes a fastq.☆44Updated 4 years ago
- A Perl/R pipeline for plotting metagenes☆37Updated 3 years ago
- RNA editing quantification in deep transcriptome data☆15Updated 2 years ago
- A Python3-base pipeline for translated circular RNA(circRNA) identification☆16Updated 2 years ago
- Define regions in the genome☆29Updated 3 years ago
- Filtering of PDX samples for mouse derived reads☆26Updated 2 years ago
- a set of NGS pipelines☆24Updated last week
- ChIP-seq DC and QC Pipeline☆34Updated 3 years ago
- A computational workflow for exitron splicing identification☆12Updated 6 months ago
- Long read to rMATS☆31Updated last year