djhn75 / RNAEditor
☆14Updated 2 years ago
Alternatives and similar repositories for RNAEditor:
Users that are interested in RNAEditor are comparing it to the libraries listed below
- RNA editing quantification in deep transcriptome data☆15Updated 2 years ago
- Identifying genome-wide translated open reading frames using ribosome profiling☆21Updated last year
- Tool for RNA-Seq analysis.☆38Updated 2 years ago
- Identifying differentially methylated regions from MethylC-seq (bisulfite-sequencing) data☆27Updated last year
- An R package to process and analyze transcriptomic data☆16Updated 5 months ago
- ORF Quantification pipeline for Alternative Splicing☆16Updated 3 years ago
- ☆23Updated 3 years ago
- simplified cellranger for long-read data☆18Updated 4 months ago
- CLIP-seq Analysis of Multi-mapped reads☆29Updated 3 years ago
- HOT regions paper☆11Updated 5 years ago
- An R package for Splice-aware quantification of translation using Ribo-seq data☆18Updated last year
- A statistical tool to detect differential alternative splicing events using single-cell RNA-seq☆22Updated last year
- ☆25Updated last week
- ChIP-seq DC and QC Pipeline☆34Updated 3 years ago
- R package to analyze aberrant splicing junctions in tumor samples to identify neoepitopes☆13Updated this week
- Merge fastq files split over lanes☆20Updated 7 years ago
- documentation for trackViewer☆29Updated 5 years ago
- TIMEOR: Trajectory Inference and Mechanism Exploration with Omics Data in R☆16Updated 2 years ago
- Pipeline for Quality Control of Ribo-Seq data, selection of P-site offsets, and codon usage statistics.☆17Updated last year
- Tutorials covering various topics in genomic data analysis.☆16Updated 6 years ago
- A Python3-base pipeline for translated circular RNA(circRNA) identification☆16Updated 2 years ago
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆38Updated 3 years ago
- Motif manipulation functions for R.☆28Updated 3 months ago
- Long read to rMATS☆31Updated last year
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆28Updated 6 months ago
- A script to make downloading of SRA/GEO data easier☆31Updated last year
- Differential ATAC-seq toolkit☆27Updated last year
- A p-value-free method for controlling false discovery rates in high-throughput biological data with two conditions☆39Updated 2 years ago
- Fork from https://bitbucket.org/mcgranahanlab/lohhla/src, modified for MSKCC needs☆30Updated last year
- Bioinformatic tool for Splice site Strength Estimation using RNA-seq☆14Updated 2 years ago