djhn75 / RNAEditor
☆15Updated 2 years ago
Alternatives and similar repositories for RNAEditor:
Users that are interested in RNAEditor are comparing it to the libraries listed below
- RNA editing quantification in deep transcriptome data☆15Updated 2 years ago
- Identifying differentially methylated regions from MethylC-seq (bisulfite-sequencing) data☆27Updated last year
- ☆23Updated 3 years ago
- Identifying genome-wide translated open reading frames using ribosome profiling☆21Updated last year
- ORF Quantification pipeline for Alternative Splicing☆16Updated 3 years ago
- CLIP-seq Analysis of Multi-mapped reads☆29Updated 3 years ago
- A script to make downloading of SRA/GEO data easier☆31Updated last year
- simplified cellranger for long-read data☆18Updated 6 months ago
- An R package for Splice-aware quantification of translation using Ribo-seq data☆18Updated last year
- TIMEOR: Trajectory Inference and Mechanism Exploration with Omics Data in R☆16Updated 3 years ago
- Tool for RNA-Seq analysis.☆38Updated 2 years ago
- RiboPlotR package for Ribo-plot☆14Updated last year
- Long read to rMATS☆31Updated last year
- An R package to process and analyze transcriptomic data☆16Updated 6 months ago
- A statistical tool to detect differential alternative splicing events using single-cell RNA-seq☆22Updated last year
- SCAN2 is a somatic SNV and indel genotyper for single cells amplified by Primary Template-Directed Amplification (PTA)☆12Updated 7 months ago
- ☆26Updated 2 weeks ago
- Scripts to import your FeatureCounts output into DEXSeq☆33Updated 6 years ago
- RNAmotifs is an integrated R, C++, python softwares that evaluates the sequence around differentially regulated alternative exons to iden…☆9Updated 6 years ago
- Locate transgenic insertion sites☆10Updated 2 years ago
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆38Updated 3 years ago
- ☆18Updated 11 months ago
- BS-Seeker3: An Ultra-fast, Versatile Pipeline for Mapping Bisulfite-treated Reads.☆27Updated 5 years ago
- Motif manipulation functions for R.☆28Updated 4 months ago
- MAnorm2 for Normalizing and Comparing ChIP-seq Samples☆32Updated 2 years ago
- ChIP-seq DC and QC Pipeline☆34Updated 4 years ago
- A whole genome bisulfite sequencing (WGBS) pipeline for the alignment and QC of DNA methylation that goes from from raw reads (FastQ) to …☆23Updated 2 years ago
- splicekit: an integrative toolkit for splicing analysis from short-read RNA-seq☆16Updated 2 weeks ago
- Accurate estimation and robust modelling of translation dynamics at codon resolution☆20Updated 7 years ago
- documentation for trackViewer☆29Updated 5 years ago