djhn75 / RNAEditor
☆15Updated 2 years ago
Alternatives and similar repositories for RNAEditor:
Users that are interested in RNAEditor are comparing it to the libraries listed below
- Identifying genome-wide translated open reading frames using ribosome profiling☆23Updated last year
- RNA editing quantification in deep transcriptome data☆15Updated 2 years ago
- Identifying differentially methylated regions from MethylC-seq (bisulfite-sequencing) data☆27Updated last year
- A script to make downloading of SRA/GEO data easier☆30Updated last year
- ORF Quantification pipeline for Alternative Splicing☆16Updated 3 years ago
- CLIP-seq Analysis of Multi-mapped reads☆30Updated 3 years ago
- ☆12Updated 9 years ago
- Long read to rMATS☆31Updated 2 years ago
- ☆23Updated 3 years ago
- An R package to process and analyze transcriptomic data☆17Updated 7 months ago
- RiboPlotR package for Ribo-plot☆15Updated last year
- splicekit: an integrative toolkit for splicing analysis from short-read RNA-seq☆16Updated last month
- A statistical tool to detect differential alternative splicing events using single-cell RNA-seq☆22Updated last year
- An R package for Splice-aware quantification of translation using Ribo-seq data☆18Updated last year
- Snakemake pipeline for running MAJIQ☆22Updated last year
- Motif manipulation functions for R.☆28Updated 2 weeks ago
- ChIP-seq DC and QC Pipeline☆34Updated 4 years ago
- ☆28Updated 4 months ago
- direct comparison of circular and linear RNA expression☆22Updated 4 years ago
- TIMEOR: Trajectory Inference and Mechanism Exploration with Omics Data in R☆16Updated 3 years ago
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆39Updated 3 years ago
- RepEnrich is a method to estimate repetitive element enrichment using high-throughput sequencing data.☆27Updated 3 years ago
- A p-value-free method for controlling false discovery rates in high-throughput biological data with two conditions☆39Updated 2 years ago
- single-cell-Isoform-Sequencing-Analysis-Tools: New and powerful tools brings single-cell RNA sequencing to the Isoform level and single m…☆24Updated 9 months ago
- Benchmarking long-read RNA-seq analysis tools☆27Updated 2 months ago
- RNA-seq workflow: differential transcript usage☆21Updated last year
- Predicting TF sequence-specificity similarity with weighted alignments☆13Updated 5 years ago
- SEASTAR - Systematic Evaluation of Alternative transcription STArt site in RNA☆13Updated 7 years ago
- IDR☆31Updated 2 years ago
- scripts for the integrating ATAC-seq, RNA-seq and CHi-C paper☆24Updated 2 years ago