☆62Jan 23, 2026Updated last month
Alternatives and similar repositories for PepINVENT
Users that are interested in PepINVENT are comparing it to the libraries listed below
Sorting:
- Python package for the analysis of natural and modified peptides using a set of modules to study their sequences☆49Nov 27, 2025Updated 3 months ago
- ☆35Jan 26, 2026Updated last month
- Official repository for DiffPepBuilder and DiffPepDock tools☆119Oct 24, 2025Updated 4 months ago
- Molecular conformer generation using enhanced sampling methods☆20Jul 28, 2025Updated 7 months ago
- ☆18Mar 13, 2024Updated last year
- ☆19Jan 18, 2026Updated last month
- List of papers about Peptide research using Deep Learning☆35Updated this week
- Implementation of CycPeptMP, an accurate and efficient model for predicting the membrane permeability of cyclic peptides☆28May 10, 2025Updated 9 months ago
- Molecular dynamics without molecules: searching the conformational space of proteins with generative neural networks☆11Jun 13, 2022Updated 3 years ago
- ☆39Apr 30, 2024Updated last year
- ☆27Oct 27, 2021Updated 4 years ago
- ☆14Nov 20, 2024Updated last year
- ☆37Aug 28, 2023Updated 2 years ago
- Target Sequence-Conditioned Generation of Peptide Binders via Masked Language Modeling☆115Oct 30, 2025Updated 4 months ago
- Introduction to cyclic peptide simulations and our group's protocols.☆16Sep 21, 2023Updated 2 years ago
- ☆13Jul 11, 2023Updated 2 years ago
- ☆27Updated this week
- ☆41Mar 26, 2025Updated 11 months ago
- ☆32Mar 18, 2025Updated 11 months ago
- ☆25Jan 30, 2025Updated last year
- ☆18Aug 5, 2023Updated 2 years ago
- Tool to design cyclic peptides that mimic proteins and target their binding partners.☆17Jul 9, 2024Updated last year
- ☆27Mar 21, 2025Updated 11 months ago
- ☆20Aug 25, 2025Updated 6 months ago
- pyPept: a python library to generate atomistic 2D and 3D representations of peptides☆87Nov 5, 2025Updated 3 months ago
- Going through a setting up a basic cheminformatics pipeline for the target EGFR☆19Apr 1, 2025Updated 11 months ago
- Learning Binding Affinities via Fine-tuning of Protein and Ligand Language Models☆37Dec 5, 2024Updated last year
- HELM-GPT: de novo macrocyclic peptide design using generative pre-trained transformer☆30Jul 4, 2024Updated last year
- ☆15Jul 15, 2020Updated 5 years ago
- ☆52Jun 25, 2025Updated 8 months ago
- AutoML system for building trustworthy peptide bioactivity predictors☆37Feb 19, 2026Updated last week
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆33Aug 10, 2023Updated 2 years ago
- Code and notebook for our paper "Assessing interaction recovery of predicted protein-ligand poses"☆20Oct 2, 2024Updated last year
- Code used to mine surfaces.☆28Feb 23, 2025Updated last year
- In silico directed evolution of peptide binders with AlphaFold☆262Jan 5, 2026Updated last month
- Tree-Invent: A novel molecular generative model constrained with topological tree☆13Jul 26, 2023Updated 2 years ago
- Neural Iterative Selection-Expansion using LigandMPNN/LASErMPNN and Boltz-2x☆31Feb 12, 2026Updated 2 weeks ago
- A toolkit developed to predict and analyze PROTAC-mediated ternary complexes using AlphaFold3 and Boltz-1.☆40Jul 17, 2025Updated 7 months ago
- CAPLA: improved prediction of protein-ligand binding affinity by a deep learning approach based on a cross-attention mechanism☆25Nov 9, 2022Updated 3 years ago