nohandsomewujun / FlowDesign
☆18Updated 5 months ago
Alternatives and similar repositories for FlowDesign:
Users that are interested in FlowDesign are comparing it to the libraries listed below
- Official open-source of Antibody Design Using a Score-based Diffusion Model Guided by Evolutionary, Physical, and Geometric Constraints☆30Updated 3 months ago
- ☆23Updated 6 months ago
- ☆14Updated 6 months ago
- ☆11Updated 2 months ago
- ☆22Updated 3 months ago
- Guiding diffusion models for antibody sequence and structure co-design with developability properties.☆32Updated 5 months ago
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆31Updated last year
- Generative diverse protein backbones by protein language model☆31Updated 4 months ago
- ☆34Updated 7 months ago
- workflow used to prepare PPB-Affinity database☆18Updated 8 months ago
- Mutational Effect Transfer Learning (METL) framework for pretraining and finetuning biophysics-informed protein language models☆34Updated 2 weeks ago
- ☆18Updated 5 months ago
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆46Updated 4 months ago
- Protein stability prediction using rewired protein generative models☆20Updated this week
- Baseline model for PPB-Affinity benchmark data☆24Updated 4 months ago
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆39Updated 5 months ago
- ☆26Updated 8 months ago
- code for SeqDance/ESMDance, biophysics-informed protein language models☆32Updated 3 weeks ago
- Official implementation of NeurIPS'24 paper "Bridge-IF: Learning Inverse Protein Folding with Markov Bridges"☆12Updated last month
- Antibody Langauge Ensemble Fusion - fuses antibody structural ensemble and language representation for property prediction☆11Updated last year
- Code for the paper "Learning to engineer protein flexibility".☆16Updated 3 weeks ago
- ☆26Updated 2 months ago
- protein structure generation with sparse all-atom denoising models☆30Updated this week
- Pretrained METL models with minimal dependencies☆14Updated 2 months ago
- This repository contains code for the paper: "Tertiary motifs as building blocks for the design of protein-binding peptides"☆17Updated last year
- Extension of ThermoMPNN for double mutant predictions☆32Updated last month
- ☆27Updated 4 months ago
- Code for designing binders to flexible peptides with AlphaFold2 Hallucination☆22Updated last year
- ☆12Updated 2 months ago
- Predicts the solubility and usability for purification of proteins expressed in E. coli using protein language models☆30Updated 4 months ago