Alternatives and similar repositories for shinyCircos:

Users that are interested in shinyCircos are comparing it to the libraries listed below

• TickingClock1992 / RIdeogram
  ☆169Updated 4 years ago
• szpiech / selscan
  Haplotype based scans for selection
  ☆120Updated last week
• ewels / sra-explorer
  Web application to explore the Sequence Read Archive.
  ☆210Updated last month
• voichek / kmersGWAS
  A library for running k-mers based GWAS
  ☆106Updated 3 months ago
• 10XGenomics / supernova
  10x Genomics Linked-Read Diploid De Novo Assembler
  ☆65Updated 6 years ago
• csoneson / ARMOR
  Light-weight Snakemake workflow for preprocessing and statistical analysis of RNA-seq data
  ☆162Updated 2 months ago
• BGI-shenzhen / PopLDdecay
  PopLDdecay: a fast and effective tool for linkage disequilibrium decay analysis based on variant call format(VCF) files
  ☆188Updated 6 months ago
• BGI-shenzhen / LDBlockShow
  LDBlockShow: a fast and convenient tool for visualizing linkage disequilibrium and haplotype blocks based on VCF files
  ☆155Updated last year
• Zhong-Lab-UCSD / Genomic-Interactive-Visualization-Engine
  Genomic Interactive Visualization Engine
  ☆145Updated 2 years ago
• showteeth / ggcoverage
  Visualize and annotate genomic coverage with ggplot2
  ☆254Updated 3 weeks ago
• bernatgel / karyoploteR
  karyoploteR - An R/Bioconductor package to plot arbitrary data along the genome
  ☆306Updated last year
• jsh58 / Genrich
  Detecting sites of genomic enrichment
  ☆190Updated last year
• dkoboldt / varscan
  Variant calling and somatic mutation/CNV detection for next-generation sequencing data
  ☆156Updated last year
• PoisonAlien / trackplot
  Generate IGV style locus tracks from bigWig files in R
  ☆154Updated 3 months ago
• zhxiaokang / RASflow
  RNA-Seq analysis workflow
  ☆104Updated 3 years ago
• bli25 / RSEM_tutorial
  A short tutorial on how to use RSEM
  ☆136Updated 4 years ago
• picrust / picrust
  Phylogenetic Investigation of Communities by Reconstruction of Unobserved STates (PICRUST): Official repository for software and unit tes…
  ☆90Updated 2 years ago
• dzhang32 / ggtranscript
  Visualizing transcript structure and annotation using ggplot2
  ☆143Updated 5 months ago
• tderrien / FEELnc
  FEELnc : FlExible Extraction of LncRNA
  ☆85Updated 5 months ago
• quinlan-lab / sllobs-biostats
  ☆70Updated 3 years ago
• alexa-kur / miQTL_cookbook
  ☆46Updated 5 years ago
• PacificBiosciences / IsoSeq
  Iso-Seq - Scalable De Novo Isoform Discovery from Single-Molecule PacBio Reads
  ☆202Updated 3 months ago
• ExpressionAnalysis / ea-utils
  Automatically exported from code.google.com/p/ea-utils
  ☆95Updated last year
• JimWhiting91 / genotype_plot
  A set of functions to visualise genotypes based on a VCF
  ☆85Updated 3 years ago
• donovan-h-parks / STAMP
  Statistical Analysis of Metagenomic Profiles
  ☆93Updated 5 years ago
• davetang / learning_vcf_file
  Learning the Variant Call Format
  ☆138Updated 10 months ago
• biostars / biostar-handbook
  Issue tracker for the Biostar Handbook
  ☆61Updated 2 years ago
• thlee / SNPhylo
  A pipeline to generate a phylogenetic tree from huge SNP data
  ☆86Updated last year
• BSSeeker / BSseeker2
  A versatile aligning pipeline for bisulfite sequencing data
  ☆65Updated 6 years ago
• roblanf / sangeranalyseR
  functions to analyse sanger sequencing reads in R
  ☆100Updated 10 months ago