an R/Shiny application for interactive creation of non-circular plots of whole genomes
☆45May 15, 2025Updated last year
Alternatives and similar repositories for shinyChromosome
Users that are interested in shinyChromosome are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A comprehensive collection of long inverted repeats in 424 eukaryotic genomes☆16Nov 4, 2021Updated 4 years ago
- A comprehensive database for efficient retrieve and analysis of SNPs among 1210 maize lines☆14Oct 10, 2022Updated 3 years ago
- Efficient compression and retrieve of genotype data with integer sparse matrices☆16Apr 11, 2025Updated last year
- an R/shiny application for creation of Circos plot interactively☆155Sep 25, 2022Updated 3 years ago
- Integrative analysis of structural variations.☆41Dec 20, 2023Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- QTL mapping with binmap data☆18May 18, 2019Updated 7 years ago
- an R/Shiny application for interactive creation of Circos plot☆50Apr 5, 2023Updated 3 years ago
- ChIA-PIPE: A fully automated pipeline for comprehensive ChIA-PET data analysis and visualization☆29Aug 13, 2021Updated 4 years ago
- Plotting average TAD heatmap for Hi-C data (give TAD segmentation and cool/hiclib interactions map).☆10Jun 5, 2021Updated 5 years ago
- A Shiny App for visualizing genomic data☆19Apr 24, 2022Updated 4 years ago
- A Shiny-based server framework for retrieving, analyzing and visualizing the large genomic variations data in a lab.☆20Oct 28, 2024Updated last year
- Pore-C support☆54Feb 22, 2023Updated 3 years ago
- R/Package Version Check☆22Oct 22, 2021Updated 4 years ago
- This is used to achieve haplotype-resolved assembly of tetraploid genomes using gamete sequencings☆14Oct 1, 2021Updated 4 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Whole Genome Annotation Pipeline☆16Jun 20, 2025Updated 11 months ago
- A viewer for multiple alignment format (MAF) files in JBrowse 2☆14Jun 3, 2026Updated last week
- Suite of command-line software for high-performance graphical analysis of ChIP-seq/RNA-seq/ATAC-seq data☆21May 2, 2022Updated 4 years ago
- ☆18May 12, 2023Updated 3 years ago
- Toolkit for single-cell analysis of chromatin accessibility☆12Feb 27, 2020Updated 6 years ago
- Genomics 3D Visualizer☆14Jun 14, 2024Updated 2 years ago
- Multi-level visualization of genomic statistical variables on rectangular chromosomes☆46May 23, 2026Updated 3 weeks ago
- CoNekT (short for Co-expression Network Toolkit) is a platform to browse co-expression data and enable cross-species comparisons.☆21Mar 5, 2023Updated 3 years ago
- A shiny application to visualize MCscan result☆37Mar 8, 2026Updated 3 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆17Jul 3, 2018Updated 7 years ago
- Transcriptomics Visualization R package.☆76May 21, 2026Updated 3 weeks ago
- QC report generator for Hi-C pairs file☆13Sep 14, 2020Updated 5 years ago
- ☆18Nov 9, 2020Updated 5 years ago
- An interactive web portal for exploring SNPs among 1,007 rapeseed germplasm accessions☆14Mar 4, 2025Updated last year
- ☆30Feb 6, 2026Updated 4 months ago
- ☆28May 8, 2021Updated 5 years ago
- An R Package based on JavaScript libraries for Visualization of Interactive Circos Plot☆28Jul 26, 2022Updated 3 years ago
- A barcode demultiplexer for Oxford Nanopore long-read amplicon sequencing data☆10Nov 27, 2024Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Annotate Olfactory receptor CDS from genome☆11Apr 29, 2023Updated 3 years ago
- Long-reads Gap-free Chromosome-scale Assembler☆79Mar 21, 2023Updated 3 years ago
- RepeatIdentifier☆74Mar 19, 2025Updated last year
- tomato graph pangenome☆92Dec 13, 2022Updated 3 years ago
- The complete sequence of a Chinese individual☆13Oct 8, 2024Updated last year
- ☆26Jan 26, 2026Updated 4 months ago
- Bedfile perturbation tool☆17Mar 6, 2026Updated 3 months ago