naumanjaved / EpiBERTView external linksLinks
☆16Dec 3, 2025Updated 2 months ago
Alternatives and similar repositories for EpiBERT
Users that are interested in EpiBERT are comparing it to the libraries listed below
Sorting:
- This repository contains the scripts developed for the analysis of CRC samples processed with the 10x VISIUM Spatial Transcriptomics tech…☆11Feb 7, 2023Updated 3 years ago
- ☆18Apr 30, 2025Updated 9 months ago
- Toolkit for metacell analysis☆23Aug 8, 2024Updated last year
- Evaluating genomic sequence models for explaining personalized expression variation☆19Dec 6, 2023Updated 2 years ago
- ☆16Dec 6, 2025Updated 2 months ago
- Unified knowledge-driven network inference from omics data☆93Updated this week
- A fast dataloader for bigwig files made for machine learning☆29Dec 16, 2025Updated last month
- Adversarial domain translation networks for integrating large-scale atlas-level single-cell datasets☆32Jul 13, 2023Updated 2 years ago
- ☆10May 31, 2022Updated 3 years ago
- An Elder Scrolls neural name generator trained using PyTorch☆10Jan 29, 2019Updated 7 years ago
- Fast python code to merge paired-end reads☆13Oct 29, 2021Updated 4 years ago
- Segmentation-free Analysis of In Situ Capture data☆13Jan 5, 2026Updated last month
- Here, we describe the comparison of the most used algorithms in classical ML and DL to classify carcinogenic tumors described on 11_tumor…☆13Apr 13, 2020Updated 5 years ago
- Repo with analysis code for the vascular atlas paper☆10Nov 22, 2024Updated last year
- Code for improving the performance of sequence-to-expression models for making individual-specific gene expression predictions by fine-tu…☆15Dec 12, 2025Updated 2 months ago
- Sample Level Analysis of Pathway Alteration Enrichments☆10Jan 21, 2019Updated 7 years ago
- ANPELA is a user-centric and application-oriented tool which is capable of navigating the data processing for single-cell proteomics (SCP…☆14Aug 12, 2025Updated 6 months ago
- ☆11Aug 11, 2025Updated 6 months ago
- Bioconductor R-package: Curated Prostate Cancer Data☆11Oct 1, 2024Updated last year
- A CLI tool that helps AI researchers share datasets responsibly.☆20Sep 15, 2025Updated 5 months ago
- Competing Genetic Algorithm to find profitable Trading Strategies on a financial market☆13May 29, 2019Updated 6 years ago
- Benchmark gene representations from different model families☆14May 29, 2025Updated 8 months ago
- ENNGene: an Easy Neural Network model building tool for Genomics☆11Mar 31, 2022Updated 3 years ago
- Meta-Analysis of Medians☆10Mar 18, 2025Updated 10 months ago
- ☆33Jan 26, 2026Updated 2 weeks ago
- Calibrated clustering with artificial variables to avoid over-clustering in single-cell RNA-sequencing☆18Nov 18, 2025Updated 2 months ago
- A tool for visualising kmers in 2D space.☆12Feb 23, 2025Updated 11 months ago
- Detecting cancer subtypes with machine learning.☆10Feb 5, 2020Updated 6 years ago
- Code for "A decision algorithm to promote outpatient antimicrobial stewardship for uncomplicated urinary tract infection"☆11Jun 27, 2021Updated 4 years ago
- ATAC-seq lab for BIOINF525☆10Mar 31, 2016Updated 9 years ago
- ☆13Feb 9, 2026Updated last week
- ExplaiNN: interpretable and transparent neural networks for genomics☆49Apr 1, 2025Updated 10 months ago
- ☆48Oct 29, 2025Updated 3 months ago
- Wrapper for Mikhail Belkin et. al's Pointcloud LB operator. Not dependent on PCL☆11Apr 11, 2014Updated 11 years ago
- Tensorflow: Generalizing Across Domains via Cross-Gradient Training☆15May 11, 2018Updated 7 years ago
- scID☆14Oct 21, 2021Updated 4 years ago
- ☆15Jan 20, 2025Updated last year
- ☆11Dec 7, 2021Updated 4 years ago
- UHCA☆11Jan 23, 2025Updated last year