Single-cell spatial elucidation through image-augmented graph transformer
☆33Jul 7, 2023Updated 2 years ago
Alternatives and similar repositories for SiGra
Users that are interested in SiGra are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆23Dec 8, 2023Updated 2 years ago
- Identify spatial domain☆92May 29, 2025Updated 11 months ago
- A probabilistic factor model for spatial transcriptomics data with subcellular resolution☆25May 3, 2023Updated 3 years ago
- ☆12Apr 3, 2023Updated 3 years ago
- ☆17Mar 18, 2025Updated last year
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- ☆14Mar 11, 2025Updated last year
- An optimal transport-based algorithm for inferring cell trajectories of spatial transcriptomics.☆40Mar 30, 2025Updated last year
- Flow2Spatial reconstructs spatial proteomics through transfer learning.☆22May 16, 2025Updated last year
- ☆41Dec 4, 2023Updated 2 years ago
- Deciphering tumor ecosystems at super-resolution from spatial transcriptomics with TESLA☆64Mar 18, 2024Updated 2 years ago
- scTM: A package for topic modelling in transcriptomics data☆24May 1, 2024Updated 2 years ago
- ☆13Feb 15, 2024Updated 2 years ago
- A sandbox for benchmarking detection of out-of-reference cells in single-cell genomics data☆14Oct 21, 2024Updated last year
- ☆156Mar 19, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- sEV-containing droplet identification in scRNA-seq data (SEVtras)☆26Feb 22, 2025Updated last year
- ☆46May 31, 2024Updated last year
- StereoMM is a graph fusion model that can integrate gene expression, histological images, and spatial location. And the information inter…☆39Dec 23, 2025Updated 4 months ago
- PDD: Awesome Phenotypic Drug Discovery☆41Oct 17, 2025Updated 7 months ago
- ☆163Dec 20, 2024Updated last year
- ☆22May 2, 2025Updated last year
- Single-cell data analysis☆14Sep 11, 2025Updated 8 months ago
- Adversarial domain translation networks for integrating large-scale atlas-level single-cell datasets☆33Jul 13, 2023Updated 2 years ago
- conST: an interpretable multi-modal contrastive learning framework for spatial transcriptomics☆29Feb 16, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆24Jul 9, 2025Updated 10 months ago
- ☆16Sep 29, 2023Updated 2 years ago
- Cell clustering for spatial transcriptomics data with graph neural network☆66Mar 31, 2023Updated 3 years ago
- Sub-cellular spatial transcriptomics Cell Segmentation☆70Oct 1, 2023Updated 2 years ago
- A novel method named stDiff investigates the potential of employing diffusion models for single-cell omics generation.☆26Mar 13, 2024Updated 2 years ago
- ☆11Apr 1, 2024Updated 2 years ago
- STAligner: Integrating spatial transcriptomics data across different conditions, technologies, and developmental stages☆26Dec 26, 2023Updated 2 years ago
- ☆13Sep 30, 2024Updated last year
- ☆19Feb 5, 2025Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- A combination of RoBERTa trained from scratch on masking histone modification patterns rather than the English language and XGBoost, pred…☆13Apr 22, 2021Updated 5 years ago
- scGCN is a graph convolutional networks algorithm for knowledge transfer in single cell omics☆40Aug 11, 2022Updated 3 years ago
- Single Cell Multi-omics deep clustering☆30Jul 1, 2025Updated 10 months ago
- A Deep Learning-Based Model for the integration, cross-dataset cross-modality generation, self augmentation and matched multi-omics simul…☆16Aug 9, 2025Updated 9 months ago
- Spot pseudo-Imager on top of histology☆50Dec 12, 2025Updated 5 months ago
- ☆11Dec 7, 2022Updated 3 years ago
- Splits fastq files evenly☆24Aug 19, 2020Updated 5 years ago